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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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1146 RNA-SM complexes found
Structure of complex 4q9q

4q9q

Crystal structure of an RNA aptamer bound to bromo-ligand analog in complex with Fab

SM: 2ZZ

Structure of complex 4q9r

4q9r

Crystal structure of an RNA aptamer bound to trifluoroethyl-ligand analog in complex with Fab

SM: 2ZY

Structure of complex 4qk8

4qk8

Thermoanaerobacter pseudethanolicus c-di-AMP riboswitch

SM: 2BA 2BA

Structure of complex 4qk9

4qk9

Thermovirga lienii c-di-AMP riboswitch

SM: 2BA 2BA

Structure of complex 4qka

4qka

c-di-AMP riboswitch from Thermoanaerobacter pseudethanolicus, iridium hexamine soak

SM: 2BA 2BA

Structure of complex 4qlm

4qlm

ydao riboswitch binding to c-di-AMP

SM: 2BA 2BA

Structure of complex 4qln

4qln

structure of ydao riboswitch binding with c-di-dAMP

SM: 2BA 2BA

Structure of complex 4qvi

4qvi

Crystal structure of mutant ribosomal protein M218L TthL1 in complex with 80nt 23S RNA from Thermus thermophilus

SM: MES

Structure of complex 4r0d

4r0d

Crystal structure of a eukaryotic group II intron lariat

SM: SPM SPM

Structure of complex 4rzd

4rzd

Crystal Structure of a PreQ1 Riboswitch

SM: PRF

Structure of complex 4ts2

4ts2

Crystal structure of the Spinach RNA aptamer in complex with DFHBI, magnesium ions

SM: 38E

Structure of complex 4tua

4tua

Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome

SM: PAR PAR

Structure of complex 4tub

4tub

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

SM: PAR PAR

Structure of complex 4tud

4tud

Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome

SM: PAR PAR

Structure of complex 4tue

4tue

Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome

SM: PAR PAR

Structure of complex 4u20

4u20

Crystal structure of the E. coli ribosome bound to flopristin.

SM: VIF VIF

Structure of complex 4u24

4u24

Crystal structure of the E. coli ribosome bound to dalfopristin.

SM: DOL DOL

Structure of complex 4u25

4u25

Crystal structure of the E. coli ribosome bound to virginiamycin M1.

SM: VIR VIR

Structure of complex 4u3m

4u3m

Crystal structure of Anisomycin bound to the yeast 80S ribosome

SM: ANM ANM

Structure of complex 4u4o

4u4o

Crystal structure of Geneticin bound to the yeast 80S ribosome

SM: GET

Structure of complex 4u4q

4u4q

Crystal structure of Homoharringtonine bound to the yeast 80S ribosome

SM: HMT HMT

Structure of complex 4u4u

4u4u

Crystal structure of Lycorine bound to the yeast 80S ribosome

SM: 3KD 3KD

Structure of complex 4u50

4u50

Crystal structure of Verrucarin bound to the yeast 80S ribosome

SM: 3L2 3L2

Structure of complex 4u51

4u51

Crystal structure of Narciclasine bound to the yeast 80S ribosome

SM: 3KF 3KF

Structure of complex 4u52

4u52

Crystal structure of Nagilactone C bound to the yeast 80S ribosome

SM: 3J2 3J2

Structure of complex 4u53

4u53

Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome

SM: 3J6 3J6

Structure of complex 4u56

4u56

Crystal structure of Blasticidin S bound to the yeast 80S ribosome

SM: BLS BLS

Structure of complex 4u6f

4u6f

Crystal structure of T-2 toxin bound to the yeast 80S ribosome

SM: ZBA ZBA

Structure of complex 4v4h

4v4h

Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.

SM: KSG KSG

Structure of complex 4v51

4v51

Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin

SM: PAR PAR

Structure of complex 4v52

4v52

Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.

SM: NMY NMY NMY NMY

Structure of complex 4v53

4v53

Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.

SM: LLL LLL LLL LLL LLL LLL LLL LLL

Structure of complex 4v55

4v55

Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).

SM: LLL LLL LLL LLL

Structure of complex 4v57

4v57

Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.

SM: NMY NMY NMY NMY SCM SCM

Structure of complex 4v5c

4v5c

Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.

SM: PAR PAR

Structure of complex 4v5d

4v5d

Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.

SM: PAR PAR

Structure of complex 4v5g

4v5g

The crystal structure of the 70S ribosome bound to EF-Tu and tRNA

SM: GDP PAR PAR

Structure of complex 4v5y

4v5y

Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).

SM: PAR PAR PAR PAR

Structure of complex 4v64

4v64

Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.

SM: HYG HYG

Structure of complex 4v7t

4v7t

Crystal structure of the E. coli ribosome bound to chloramphenicol.

SM: CLM

Structure of complex 4v7v

4v7v

Crystal structure of the E. coli ribosome bound to clindamycin.

SM: CLY

Structure of complex 4v7w

4v7w

Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.

SM: CLM CLM

Structure of complex 4v8a

4v8a

The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.

SM: T8B T8B

Structure of complex 4v8c

4v8c

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).

SM: PAR PAR

Structure of complex 4v8f

4v8f

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).

SM: PAR PAR

Structure of complex 4v8j

4v8j

Crystal structure of the bacterial ribosome ram mutation G347U.

SM: PAR PAR

Structure of complex 4v97

4v97

Crystal structure of the bacterial ribosome ram mutation G299A.

SM: PAR PAR

Structure of complex 4v9a

4v9a

Crystal Structure of the 70S ribosome with tetracycline.

SM: TAC TAC

Structure of complex 4v9b

4v9b

Crystal Structure of the 70S ribosome with tigecycline.

SM: T1C T1C

Structure of complex 4v9c

4v9c

Allosteric control of the ribosome by small-molecule antibiotics

SM: NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY

Structure of complex 4v9q

4v9q

Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.

SM: BLS BLS

Structure of complex 4w29

4w29

70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.

SM: FUA FUA NMY NMY NMY NMY NMY NMY

Structure of complex 4w2i

4w2i

Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites

SM: NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG

Structure of complex 4w90

4w90

Crystal structure of Bacillus subtilis cyclic-di-AMP riboswitch ydaO

SM: 2BA 2BA

Structure of complex 4w92

4w92

Crystal structure of Bacillus subtilis cyclic-di-AMP riboswitch ydaO

SM: 2BA 2BA

Structure of complex 4wf1

4wf1

Crystal structure of the E. coli ribosome bound to negamycin.

SM: NEG

Structure of complex 4wfa

4wfa

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

SM: EPE EPE EPE EPE ZLD

Structure of complex 4wfb

4wfb

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205

SM: 3LK EPE EPE EPE EPE

Structure of complex 4wfn

4wfn

Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22 in complex with erythromycin

SM: ERY

Structure of complex 4woi

4woi

4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2

SM: PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR