HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4wfb

System information

Experimental technique X-ray
Experimental resolution 3.43
System mass 1367.05 kDa
Deposition year 2014
Molecule type RNA/Protein
# RNA entities 1
Organism Staphylococcus
RCSB PDB Entry 4wfb
Reference Eyal Zohar, Matzov Donna, Krupkin Miri, Wekselman Itai, Paukner Susanne, Zimmerman Ella, Rozenberg Haim, Bashan Anat, Yonath Ada. . Structural insights into species-specific features of the ribosome from the pathogen Staphylococcus aureus Proceedings of the National Academy of Sciences

Compound 3LK
Residue . / 3001
Chain CA / X
Non-redundant True
Interacting RNA chains A/X
Volume 674.00 Å3
Hydrophobicity 0.359
Hydrophilicity 1.185
Buriedness 0.769
Don/acc character 1.397
SiteScore 1.198
D Score 1.015

Compound EPE
Residue . / 3421
Chain GQ / X
Non-redundant True
Interacting RNA chains A/X
Volume 383.47 Å3
Hydrophobicity 0.014
Hydrophilicity 1.292
Buriedness 0.791
Don/acc character 2.196
SiteScore 0.943
D Score 0.648

Compound EPE
Residue . / 3422
Chain HQ / X
Non-redundant True
Interacting RNA chains A/X
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound EPE
Residue . / 3423
Chain IQ / X
Non-redundant True
Interacting RNA chains A/X
Volume 61.40 Å3
Hydrophobicity 0.014
Hydrophilicity 0.615
Buriedness 0.522
Don/acc character 4.847
SiteScore 1.110
D Score 1.048

Compound EPE
Residue . / 3424
Chain JQ / X
Non-redundant True
Interacting RNA chains A/X
Volume 242.16 Å3
Hydrophobicity 0.019
Hydrophilicity 0.707
Buriedness 0.519
Don/acc character 3.122
SiteScore 0.945
D Score 1.021