Complex 4woi
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.00 |
| System mass | 4419.08 kDa |
| Deposition year | 2014 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 4woi |
| Reference | Wasserman Michael R., Pulk Arto, Zhou Zhou, Altman Roger B., Zinder John C., Green Keith D., Garneau-Tsodikova Sylvie, Doudna Cate Jamie H., Blanchard Scott C.. . Chemically related 4,5-linked aminoglycoside antibiotics drive subunit rotation in opposite directions Nature Communications |
| Compound | PAR |
| Residue | . / 1672 |
| Chain | ZF / AA |
| Non-redundant | True |
| Interacting RNA chains | Y/BA, A/AA |
| Volume | 420.18 Å3 |
| Hydrophobicity | 0.089 |
| Hydrophilicity | 1.250 |
| Buriedness | 0.665 |
| Don/acc character | 1.048 |
| SiteScore | 1.124 |
| D Score | 0.927 |
| Compound | PAR |
| Residue | . / 3001 |
| Chain | BG / BA |
| Non-redundant | True |
| Interacting RNA chains | Y/BA, A/AA |
| Volume | 241.13 Å3 |
| Hydrophobicity | 0.297 |
| Hydrophilicity | 0.810 |
| Buriedness | 0.695 |
| Don/acc character | 1.919 |
| SiteScore | 0.923 |
| D Score | 0.748 |
| Compound | PAR |
| Residue | . / 3002 |
| Chain | CG / BA |
| Non-redundant | True |
| Interacting RNA chains | Y/BA |
| Volume | 142.35 Å3 |
| Hydrophobicity | 0.094 |
| Hydrophilicity | 0.782 |
| Buriedness | 0.602 |
| Don/acc character | 2.915 |
| SiteScore | 0.647 |
| D Score | 0.613 |
| Compound | PAR |
| Residue | . / 3003 |
| Chain | DG / BA |
| Non-redundant | True |
| Interacting RNA chains | Y/BA |
| Volume | 385.88 Å3 |
| Hydrophobicity | 0.009 |
| Hydrophilicity | 1.094 |
| Buriedness | 0.623 |
| Don/acc character | 1.455 |
| SiteScore | 1.062 |
| D Score | 0.909 |
| Compound | PAR |
| Residue | . / 3004 |
| Chain | EG / BA |
| Non-redundant | True |
| Interacting RNA chains | Y/BA |
| Volume | 148.18 Å3 |
| Hydrophobicity | 0.222 |
| Hydrophilicity | 0.855 |
| Buriedness | 0.622 |
| Don/acc character | 3.120 |
| SiteScore | 0.877 |
| D Score | 0.703 |
| Compound | PAR |
| Residue | . / 3005 |
| Chain | FG / BA |
| Non-redundant | True |
| Interacting RNA chains | Y/BA |
| Volume | 226.72 Å3 |
| Hydrophobicity | 0.026 |
| Hydrophilicity | 0.969 |
| Buriedness | 0.645 |
| Don/acc character | 3.032 |
| SiteScore | 0.817 |
| D Score | 0.611 |
| Compound | PAR |
| Residue | . / 3166 |
| Chain | FU / CA |
| Non-redundant | True |
| Interacting RNA chains | EB/CA |
| Volume | 77.18 Å3 |
| Hydrophobicity | 0.044 |
| Hydrophilicity | 0.958 |
| Buriedness | 0.642 |
| Don/acc character | 2.362 |
| SiteScore | 0.542 |
| D Score | 0.261 |
| Compound | PAR |
| Residue | . / 3167 |
| Chain | GU / CA |
| Non-redundant | True |
| Interacting RNA chains | EB/CA, JC/DA |
| Volume | 273.03 Å3 |
| Hydrophobicity | 0.219 |
| Hydrophilicity | 0.872 |
| Buriedness | 0.670 |
| Don/acc character | 1.600 |
| SiteScore | 0.944 |
| D Score | 0.776 |
| Compound | PAR |
| Residue | . / 3168 |
| Chain | HU / CA |
| Non-redundant | True |
| Interacting RNA chains | EB/CA |
| Volume | 242.84 Å3 |
| Hydrophobicity | 0.008 |
| Hydrophilicity | 1.016 |
| Buriedness | 0.641 |
| Don/acc character | 3.379 |
| SiteScore | 0.897 |
| D Score | 0.711 |
| Compound | PAR |
| Residue | . / 3169 |
| Chain | IU / CA |
| Non-redundant | True |
| Interacting RNA chains | EB/CA |
| Volume | 326.54 Å3 |
| Hydrophobicity | 0.049 |
| Hydrophilicity | 1.161 |
| Buriedness | 0.651 |
| Don/acc character | 1.729 |
| SiteScore | 1.012 |
| D Score | 0.815 |
| Compound | PAR |
| Residue | . / 3170 |
| Chain | JU / CA |
| Non-redundant | True |
| Interacting RNA chains | EB/CA |
| Volume | 310.76 Å3 |
| Hydrophobicity | 0.209 |
| Hydrophilicity | 0.885 |
| Buriedness | 0.677 |
| Don/acc character | 3.691 |
| SiteScore | 0.735 |
| D Score | 0.697 |
| Compound | PAR |
| Residue | . / 1654 |
| Chain | RW / DA |
| Non-redundant | True |
| Interacting RNA chains | JC/DA |
| Volume | 217.46 Å3 |
| Hydrophobicity | 0.305 |
| Hydrophilicity | 0.805 |
| Buriedness | 0.660 |
| Don/acc character | 2.530 |
| SiteScore | 0.950 |
| D Score | 0.792 |
| Compound | PAR |
| Residue | . / 1655 |
| Chain | SW / DA |
| Non-redundant | True |
| Interacting RNA chains | EB/CA, JC/DA |
| Volume | 162.58 Å3 |
| Hydrophobicity | 0.022 |
| Hydrophilicity | 1.017 |
| Buriedness | 0.616 |
| Don/acc character | 2.248 |
| SiteScore | 0.831 |
| D Score | 0.633 |