HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4v57

System information

Experimental technique X-ray
Experimental resolution 3.50
System mass 4298.30 kDa
Deposition year 2007
Molecule type RNA/Protein
# RNA entities 3
Organism Escherichia
RCSB PDB Entry 4v57
Reference Borovinskaya Maria A., Shoji Shinichiro, Holton James M., Fredrick Kurt, Cate Jamie H. D.. . A Steric Block in Translation Caused by the Antibiotic Spectinomycin ACS Chemical Biology

Compound NMY
Residue . / 1601
Chain AD / AA
Non-redundant False
Interacting RNA chains A/AA
Volume 151.95 Å3
Hydrophobicity 0.111
Hydrophilicity 0.922
Buriedness 0.651
Don/acc character 0.937
SiteScore 0.797
D Score 0.781

Compound NMY
Residue . / 3001
Chain KF / BB
Non-redundant False
Interacting RNA chains A/AA, W/BB
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound NMY
Residue . / 1601
Chain SJ / CA
Non-redundant False
Interacting RNA chains AB/CA
Volume 166.70 Å3
Hydrophobicity 0.189
Hydrophilicity 0.954
Buriedness 0.662
Don/acc character 0.834
SiteScore 0.851
D Score 0.844

Compound NMY
Residue . / 3001
Chain BM / DB
Non-redundant True
Interacting RNA chains AB/CA, WB/DB
Volume 148.52 Å3
Hydrophobicity 0.313
Hydrophilicity 0.738
Buriedness 0.654
Don/acc character 1.305
SiteScore 0.640
D Score 0.593