HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4v9q

System information

Experimental technique X-ray
Experimental resolution 3.40
System mass 4417.69 kDa
Deposition year 2013
Molecule type RNA/Protein
# RNA entities 5
Organism Thermus
RCSB PDB Entry 4v9q
Reference Svidritskiy Egor, Ling Clarence, Ermolenko Dmitri N., Korostelev Andrei A.. . Blasticidin S inhibits translation by trapping deformed tRNA on the ribosome Proceedings of the National Academy of Sciences

Compound BLS
Residue . / 4001
Chain ED / AA
Non-redundant True
Interacting RNA chains A/AA, ZA/BV
Volume 1061.58 Å3
Hydrophobicity 0.357
Hydrophilicity 1.001
Buriedness 0.712
Don/acc character 0.917
SiteScore 1.017
D Score 1.041

Compound BLS
Residue . / 4405
Chain ZJE / CA
Non-redundant False
Interacting RNA chains CB/CA, BD/DV
Volume 943.25 Å3
Hydrophobicity 0.368
Hydrophilicity 0.989
Buriedness 0.723
Don/acc character 1.023
SiteScore 1.027
D Score 1.051