Complex 4v9q
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.40 |
| System mass | 4417.69 kDa |
| Deposition year | 2013 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Thermus |
| RCSB PDB Entry | 4v9q |
| Reference | Svidritskiy Egor, Ling Clarence, Ermolenko Dmitri N., Korostelev Andrei A.. . Blasticidin S inhibits translation by trapping deformed tRNA on the ribosome Proceedings of the National Academy of Sciences |
| Equivalence Class |
NR_all_97519.80,
NR_all_29909.3,
NR_all_42622.80
BGSU version: 4.48 |
| Compound | BLS |
| Residue | . / 4001 |
| Chain | ED / AA |
| Non-redundant | True |
| Interacting RNA chains | A/AA, ZA/BV |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/AA: rRNA, ZA/BV: tRNA |
| RNA family global | multiple |
| Volume | 167.73 Å3 |
| Hydrophobicity | 0.310 |
| Hydrophilicity | 1.668 |
| Buriedness | 0.753 |
| Don/acc character | 0.303 |
| SiteScore | 0.846 |
| D Score | 0.272 |
| Kd | — |
| Compound | BLS |
| Residue | . / 4405 |
| Chain | ZJE / CA |
| Non-redundant | True |
| Interacting RNA chains | CB/CA, BD/DV |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | BD/DV: tRNA, CB/CA: rRNA |
| RNA family global | multiple |
| Volume | 445.21 Å3 |
| Hydrophobicity | 0.056 |
| Hydrophilicity | 2.512 |
| Buriedness | 0.784 |
| Don/acc character | 0.535 |
| SiteScore | 0.988 |
| D Score | 0.310 |
| Kd | — |