HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4tub

System information

Experimental technique X-ray
Experimental resolution 3.60
System mass 4440.25 kDa
Deposition year 2014
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 4tub
Reference Fagan Crystal E., Maehigashi Tatsuya, Dunkle Jack A., Miles Stacey J., Dunham Christine M.. . Structural insights into translational recoding by frameshift suppressor tRNASufJ RNA
Equivalence Class NR_all_65795.87
BGSU version: 4.49

Compound PAR
Residue . / 1681
Chain KG / QA
Non-redundant True
Interacting RNA chains A/QA
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/QA: rRNA
RNA family global rRNA
Volume 281.95 Å3
Hydrophobicity 0.102
Hydrophilicity 1.080
Buriedness 0.686
Don/acc character 2.565
SiteScore 1.068
D Score 0.905
Kd

Compound PAR
Residue . / 1710
Chain AY / XA
Non-redundant True
Interacting RNA chains EB/XA
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains EB/XA: rRNA
RNA family global rRNA
Volume 600.59 Å3
Hydrophobicity 0.105
Hydrophilicity 1.127
Buriedness 0.700
Don/acc character 1.860
SiteScore 1.151
D Score 0.993
Kd