Complex 4v5y
System information
Experimental technique | X-ray |
Experimental resolution | 4.45 |
System mass | 4339.77 kDa |
Deposition year | 2007 |
Molecule type | RNA/Protein |
# RNA entities | 3 |
Organism | Escherichia |
RCSB PDB Entry | 4v5y |
Reference | Borovinskaya Maria A, Pai Raj D, Zhang Wen, Schuwirth Barbara S, Holton James M, Hirokawa Go, Kaji Hideko, Kaji Akira, Cate Jamie H Doudna. . Structural basis for aminoglycoside inhibition of bacterial ribosome recycling Nature Structural & Molecular Biology |
Compound | PAR |
Residue | . / 1661 |
Chain | KF / AA |
Non-redundant | True |
Interacting RNA chains | A/AA |
Volume | 243.87 Å3 |
Hydrophobicity | 0.024 |
Hydrophilicity | 1.041 |
Buriedness | 0.630 |
Don/acc character | 3.002 |
SiteScore | 0.602 |
D Score | 0.527 |
Compound | PAR |
Residue | . / 3111 |
Chain | RJ / BB |
Non-redundant | True |
Interacting RNA chains | W/BB, A/AA |
Volume | 220.21 Å3 |
Hydrophobicity | 0.059 |
Hydrophilicity | 1.342 |
Buriedness | 0.646 |
Don/acc character | 1.537 |
SiteScore | 0.867 |
D Score | 0.764 |
Compound | PAR |
Residue | . / 1662 |
Chain | CM / CA |
Non-redundant | False |
Interacting RNA chains | BB/CA |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | PAR |
Residue | . / 3112 |
Chain | LQ / DB |
Non-redundant | True |
Interacting RNA chains | BB/CA, XB/DB |
Volume | 177.33 Å3 |
Hydrophobicity | 0.215 |
Hydrophilicity | 0.932 |
Buriedness | 0.692 |
Don/acc character | 2.493 |
SiteScore | 0.665 |
D Score | 0.600 |