Complex 4v52
System information
Experimental technique | X-ray |
Experimental resolution | 3.21 |
System mass | 4297.71 kDa |
Deposition year | 2007 |
Molecule type | RNA/Protein |
# RNA entities | 3 |
Organism | Escherichia |
RCSB PDB Entry | 4v52 |
Reference | Borovinskaya Maria A, Pai Raj D, Zhang Wen, Schuwirth Barbara S, Holton James M, Hirokawa Go, Kaji Hideko, Kaji Akira, Cate Jamie H Doudna. . Structural basis for aminoglycoside inhibition of bacterial ribosome recycling Nature Structural & Molecular Biology |
Compound | NMY |
Residue | . / 1601 |
Chain | AD / AA |
Non-redundant | True |
Interacting RNA chains | A/AA |
Volume | 252.45 Å3 |
Hydrophobicity | 0.010 |
Hydrophilicity | 1.073 |
Buriedness | 0.647 |
Don/acc character | 3.120 |
SiteScore | 0.666 |
D Score | 0.594 |
Compound | NMY |
Residue | . / 3001 |
Chain | JF / BB |
Non-redundant | True |
Interacting RNA chains | W/BB, A/AA |
Volume | 174.24 Å3 |
Hydrophobicity | 0.045 |
Hydrophilicity | 1.188 |
Buriedness | 0.598 |
Don/acc character | 1.415 |
SiteScore | 0.768 |
D Score | 0.700 |
Compound | NMY |
Residue | . / 1601 |
Chain | RJ / CA |
Non-redundant | False |
Interacting RNA chains | AB/CA |
Volume | 202.03 Å3 |
Hydrophobicity | 0.000 |
Hydrophilicity | 1.135 |
Buriedness | 0.649 |
Don/acc character | 1.885 |
SiteScore | 0.629 |
D Score | 0.525 |
Compound | NMY |
Residue | . / 3001 |
Chain | CM / DB |
Non-redundant | True |
Interacting RNA chains | AB/CA, WB/DB |
Volume | 178.36 Å3 |
Hydrophobicity | 0.012 |
Hydrophilicity | 1.335 |
Buriedness | 0.644 |
Don/acc character | 1.498 |
SiteScore | 0.765 |
D Score | 0.636 |