Complex 4v9a
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.30 |
| System mass | 4410.19 kDa |
| Deposition year | 2012 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Thermus |
| RCSB PDB Entry | 4v9a |
| Reference | Jenner Lasse, Starosta Agata L., Terry Daniel S., Mikolajka Aleksandra, Filonava Liudmila, Yusupov Marat, Blanchard Scott C., Wilson Daniel N., Yusupova Gulnara. . Structural basis for potent inhibitory activity of the antibiotic tigecycline during protein synthesis Proceedings of the National Academy of Sciences |
| Equivalence Class |
NR_all_65795.87,
NR_all_42622.80
BGSU version: 4.49 |
| Compound | TAC |
| Residue | . / 1833 |
| Chain | AM / AA |
| Non-redundant | True |
| Interacting RNA chains | A/AA |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/AA: rRNA |
| RNA family global | rRNA |
| Volume | 138.92 Å3 |
| Hydrophobicity | 0.060 |
| Hydrophilicity | 1.587 |
| Buriedness | 0.688 |
| Don/acc character | 0.499 |
| SiteScore | 1.110 |
| D Score | 0.792 |
| Kd | — |
| Compound | TAC |
| Residue | . / 1805 |
| Chain | MUA / CA |
| Non-redundant | True |
| Interacting RNA chains | BB/CA |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | BB/CA: rRNA |
| RNA family global | rRNA |
| Volume | 213.35 Å3 |
| Hydrophobicity | 0.142 |
| Hydrophilicity | 1.453 |
| Buriedness | 0.646 |
| Don/acc character | 0.798 |
| SiteScore | 1.115 |
| D Score | 0.854 |
| Kd | — |