HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4qlm

System information

Experimental technique X-ray
Experimental resolution 2.72
System mass 42.07 kDa
Deposition year 2014
Molecule type RNA
# RNA entities 1
Organism Caldanaerobacter
RCSB PDB Entry 4qlm
Reference Ren Aiming, Patel Dinshaw J. . c-di-AMP binds the ydaO riboswitch in two pseudo-symmetry–related pockets Nature Chemical Biology

Compound 2BA
Residue . / 203
Chain D / A
Non-redundant False
Interacting RNA chains A/A
Volume 481.57 Å3
Hydrophobicity 0.432
Hydrophilicity 1.004
Buriedness 0.741
Don/acc character 1.231
SiteScore 1.036
D Score 1.057

Compound 2BA
Residue . / 204
Chain E / A
Non-redundant False
Interacting RNA chains A/A
Volume 338.20 Å3
Hydrophobicity 0.399
Hydrophilicity 0.945
Buriedness 0.712
Don/acc character 0.845
SiteScore 0.983
D Score 1.001