HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4qlm

System information

Experimental technique X-ray
Experimental resolution 2.72
System mass 42.07 kDa
Deposition year 2014
Molecule type RNA
# RNA entities 1
Organism Caldanaerobacter
RCSB PDB Entry 4qlm
Reference Ren Aiming, Patel Dinshaw J. . c-di-AMP binds the ydaO riboswitch in two pseudo-symmetry–related pockets Nature Chemical Biology

Compound 2BA
Residue . / 203
Chain D / A
Non-redundant False
Interacting RNA chains A/A
Volume 499.07 Å3
Hydrophobicity 0.429
Hydrophilicity 1.035
Buriedness 0.746
Don/acc character 1.659
SiteScore 1.184
D Score 1.050

Compound 2BA
Residue . / 204
Chain E / A
Non-redundant False
Interacting RNA chains A/A
Volume 340.26 Å3
Hydrophobicity 0.373
Hydrophilicity 0.989
Buriedness 0.715
Don/acc character 1.105
SiteScore 1.122
D Score 0.983