HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4qlm

System information

Experimental technique X-ray
Experimental resolution 2.72
System mass 42.07 kDa
Deposition year 2014
Molecule type RNA
# RNA entities 1
Organism Caldanaerobacter
RCSB PDB Entry 4qlm
Reference Ren Aiming, Patel Dinshaw J. . c-di-AMP binds the ydaO riboswitch in two pseudo-symmetry–related pockets Nature Chemical Biology

Compound 2BA
Residue . / 203
Chain D / A
Non-redundant False
Interacting RNA chains A/A
Volume 471.97 Å3
Hydrophobicity 0.607
Hydrophilicity 0.919
Buriedness 0.744
Don/acc character 0.705
SiteScore 1.054
D Score 1.087

Compound 2BA
Residue . / 204
Chain E / A
Non-redundant False
Interacting RNA chains A/A
Volume 333.40 Å3
Hydrophobicity 0.428
Hydrophilicity 0.901
Buriedness 0.714
Don/acc character 0.325
SiteScore 0.993
D Score 1.017