HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4v5c

System information

Experimental technique X-ray
Experimental resolution 3.30
System mass 4519.39 kDa
Deposition year 2009
Molecule type RNA/Protein
# RNA entities 7
Organism Thermus
RCSB PDB Entry 4v5c
Reference Voorhees Rebecca M, Weixlbaumer Albert, Loakes David, Kelley Ann C, Ramakrishnan V. . Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome Nature Structural & Molecular Biology

Compound PAR
Residue . / 1814
Chain PL / AA
Non-redundant False
Interacting RNA chains A/AA
Volume 304.58 Å3
Hydrophobicity 0.104
Hydrophilicity 1.031
Buriedness 0.658
Don/acc character 3.701
SiteScore 0.868
D Score 0.861

Compound PAR
Residue . / 1817
Chain JOA / CA
Non-redundant False
Interacting RNA chains FB/CA
Volume 249.70 Å3
Hydrophobicity 0.088
Hydrophilicity 1.044
Buriedness 0.677
Don/acc character 2.196
SiteScore 0.835
D Score 0.812