HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4v5c

System information

Experimental technique X-ray
Experimental resolution 3.30
System mass 4519.39 kDa
Deposition year 2009
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 4v5c
Reference Voorhees Rebecca M, Weixlbaumer Albert, Loakes David, Kelley Ann C, Ramakrishnan V. . Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome Nature Structural & Molecular Biology

Compound PAR
Residue . / 1814
Chain PL / AA
Non-redundant False
Interacting RNA chains A/AA
Volume 237.70 Å3
Hydrophobicity 0.169
Hydrophilicity 1.143
Buriedness 0.677
Don/acc character 1.032
SiteScore 1.038
D Score 0.848

Compound PAR
Residue . / 1817
Chain JOA / CA
Non-redundant True
Interacting RNA chains FB/CA
Volume 251.42 Å3
Hydrophobicity 0.170
Hydrophilicity 1.136
Buriedness 0.673
Don/acc character 1.307
SiteScore 1.022
D Score 0.831