HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4v5c

System information

Experimental technique X-ray
Experimental resolution 3.30
System mass 4519.39 kDa
Deposition year 2009
Molecule type RNA/Protein
# RNA entities 7
Organism Thermus
RCSB PDB Entry 4v5c
Reference Voorhees Rebecca M, Weixlbaumer Albert, Loakes David, Kelley Ann C, Ramakrishnan V. . Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome Nature Structural & Molecular Biology

Compound PAR
Residue . / 1814
Chain PL / AA
Non-redundant False
Interacting RNA chains A/AA
Volume 312.47 Å3
Hydrophobicity 0.252
Hydrophilicity 0.893
Buriedness 0.654
Don/acc character 1.084
SiteScore 0.942
D Score 0.968

Compound PAR
Residue . / 1817
Chain JOA / CA
Non-redundant False
Interacting RNA chains FB/CA
Volume 245.93 Å3
Hydrophobicity 0.224
Hydrophilicity 0.969
Buriedness 0.680
Don/acc character 0.816
SiteScore 0.841
D Score 0.826