Complex 4v53
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.54 |
| System mass | 4298.85 kDa |
| Deposition year | 2007 |
| Molecule type | RNA/Protein |
| # RNA entities | 3 |
| Organism | Escherichia |
| RCSB PDB Entry | 4v53 |
| Reference | Borovinskaya Maria A, Pai Raj D, Zhang Wen, Schuwirth Barbara S, Holton James M, Hirokawa Go, Kaji Hideko, Kaji Akira, Cate Jamie H Doudna. . Structural basis for aminoglycoside inhibition of bacterial ribosome recycling Nature Structural & Molecular Biology |
| Compound | LLL |
| Residue | . / 2061 |
| Chain | IF / AA |
| Non-redundant | True |
| Interacting RNA chains | A/AA |
| Volume | 442.81 Å3 |
| Hydrophobicity | 0.101 |
| Hydrophilicity | 1.052 |
| Buriedness | 0.639 |
| Don/acc character | 3.059 |
| SiteScore | 0.957 |
| D Score | 0.976 |
| Compound | LLL |
| Residue | . / 2062 |
| Chain | JF / AA |
| Non-redundant | True |
| Interacting RNA chains | A/AA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | LLL |
| Residue | . / 2063 |
| Chain | KF / AA |
| Non-redundant | True |
| Interacting RNA chains | A/AA |
| Volume | 696.98 Å3 |
| Hydrophobicity | 0.037 |
| Hydrophilicity | 1.330 |
| Buriedness | 0.749 |
| Don/acc character | 2.179 |
| SiteScore | 1.034 |
| D Score | 0.956 |
| Compound | LLL |
| Residue | . / 3111 |
| Chain | RJ / BB |
| Non-redundant | True |
| Interacting RNA chains | W/BB |
| Volume | 125.54 Å3 |
| Hydrophobicity | 0.058 |
| Hydrophilicity | 1.151 |
| Buriedness | 0.631 |
| Don/acc character | 3.843 |
| SiteScore | 0.588 |
| D Score | 0.473 |
| Compound | LLL |
| Residue | . / 2062 |
| Chain | CM / CA |
| Non-redundant | False |
| Interacting RNA chains | AB/CA |
| Volume | 173.56 Å3 |
| Hydrophobicity | 0.163 |
| Hydrophilicity | 0.997 |
| Buriedness | 0.652 |
| Don/acc character | 2.298 |
| SiteScore | 0.758 |
| D Score | 0.724 |
| Compound | LLL |
| Residue | . / 3112 |
| Chain | NQ / DB |
| Non-redundant | False |
| Interacting RNA chains | WB/DB |
| Volume | 189.68 Å3 |
| Hydrophobicity | 0.049 |
| Hydrophilicity | 1.370 |
| Buriedness | 0.706 |
| Don/acc character | 2.118 |
| SiteScore | 0.667 |
| D Score | 0.483 |