Complex 4v53
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.54 |
| System mass | 4298.85 kDa |
| Deposition year | 2007 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Escherichia |
| RCSB PDB Entry | 4v53 |
| Reference | Borovinskaya Maria A, Pai Raj D, Zhang Wen, Schuwirth Barbara S, Holton James M, Hirokawa Go, Kaji Hideko, Kaji Akira, Cate Jamie H Doudna. . Structural basis for aminoglycoside inhibition of bacterial ribosome recycling Nature Structural & Molecular Biology |
| Compound | LLL |
| Residue | . / 2061 |
| Chain | IF / AA |
| Non-redundant | True |
| Interacting RNA chains | A/AA |
| Volume | 443.16 Å3 |
| Hydrophobicity | 0.081 |
| Hydrophilicity | 0.998 |
| Buriedness | 0.638 |
| Don/acc character | 3.376 |
| SiteScore | 1.100 |
| D Score | 0.974 |
| Compound | LLL |
| Residue | . / 2062 |
| Chain | JF / AA |
| Non-redundant | True |
| Interacting RNA chains | A/AA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | LLL |
| Residue | . / 2063 |
| Chain | KF / AA |
| Non-redundant | True |
| Interacting RNA chains | A/AA |
| Volume | 432.18 Å3 |
| Hydrophobicity | 0.073 |
| Hydrophilicity | 1.058 |
| Buriedness | 0.648 |
| Don/acc character | 3.588 |
| SiteScore | 0.974 |
| D Score | 0.802 |
| Compound | LLL |
| Residue | . / 3111 |
| Chain | RJ / BB |
| Non-redundant | True |
| Interacting RNA chains | W/BB |
| Volume | 126.22 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.280 |
| Buriedness | 0.646 |
| Don/acc character | 2.131 |
| SiteScore | 0.763 |
| D Score | 0.459 |
| Compound | LLL |
| Residue | . / 2062 |
| Chain | CM / CA |
| Non-redundant | True |
| Interacting RNA chains | AB/CA |
| Volume | 171.16 Å3 |
| Hydrophobicity | 0.195 |
| Hydrophilicity | 0.971 |
| Buriedness | 0.654 |
| Don/acc character | 2.138 |
| SiteScore | 0.898 |
| D Score | 0.713 |
| Compound | LLL |
| Residue | . / 2063 |
| Chain | DM / CA |
| Non-redundant | True |
| Interacting RNA chains | AB/CA |
| Volume | 59.68 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.283 |
| Buriedness | 0.659 |
| Don/acc character | 2.108 |
| SiteScore | 0.598 |
| D Score | 0.243 |
| Compound | LLL |
| Residue | . / 2064 |
| Chain | EM / CA |
| Non-redundant | True |
| Interacting RNA chains | AB/CA |
| Volume | 137.54 Å3 |
| Hydrophobicity | 0.007 |
| Hydrophilicity | 1.058 |
| Buriedness | 0.615 |
| Don/acc character | 1.616 |
| SiteScore | 0.783 |
| D Score | 0.564 |
| Compound | LLL |
| Residue | . / 3112 |
| Chain | NQ / DB |
| Non-redundant | True |
| Interacting RNA chains | WB/DB |
| Volume | 186.25 Å3 |
| Hydrophobicity | 0.131 |
| Hydrophilicity | 1.369 |
| Buriedness | 0.710 |
| Don/acc character | 1.571 |
| SiteScore | 0.806 |
| D Score | 0.468 |