HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4w90

System information

Experimental technique X-ray
Experimental resolution 3.12
System mass 50.43 kDa
Deposition year 2014
Molecule type RNA/Protein
# RNA entities 1
Organism Bacillus
RCSB PDB Entry 4w90
Reference Jones Christopher P, Ferré‐D'Amaré Adrian R. . Crystal structure of a c‐di‐AMP riboswitch reveals an internally pseudo‐dimeric RNA The EMBO Journal
Equivalence Class NR_all_00626.3
BGSU version: 4.49

Compound 2BA
Residue . / 201
Chain C / C
Non-redundant True
Interacting RNA chains B/C
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains B/C: riboswitch
RNA family global riboswitch
Volume 432.87 Å3
Hydrophobicity 0.428
Hydrophilicity 0.977
Buriedness 0.717
Don/acc character 1.202
SiteScore 1.025
D Score 1.052
Kd 53.1nM

Compound 2BA
Residue . / 202
Chain D / C
Non-redundant True
Interacting RNA chains B/C
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains B/C: riboswitch
RNA family global riboswitch
Volume 383.13 Å3
Hydrophobicity 0.210
Hydrophilicity 0.954
Buriedness 0.675
Don/acc character 1.481
SiteScore 0.877
D Score 0.875
Kd 53.1nM