HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4u4q

System information

Experimental technique X-ray
Experimental resolution 3.00
System mass 6632.32 kDa
Deposition year 2014
Molecule type RNA/Protein
# RNA entities 1
Organism Saccharomyces
RCSB PDB Entry 4u4q
Reference Garreau de Loubresse Nicolas, Prokhorova Irina, Holtkamp Wolf, Rodnina Marina V., Yusupova Gulnara, Yusupov Marat. . Structural basis for the inhibition of the eukaryotic ribosome Nature
Equivalence Class NR_all_90506.85
BGSU version: 4.49

Compound HMT
Residue . / 4217
Chain CWA / 1
Non-redundant True
Interacting RNA chains JA/1
RNA environment detailled ion
RNA environment global RNA
RNA family chains JA/1: rRNA
RNA family global rRNA
Volume 1025.91 Å3
Hydrophobicity 0.361
Hydrophilicity 1.396
Buriedness 0.778
Don/acc character 1.047
SiteScore 1.204
D Score 0.952
Kd

Compound HMT
Residue . / 4255
Chain WUC / 5
Non-redundant True
Interacting RNA chains KD/5
RNA environment detailled ion
RNA environment global RNA
RNA family chains KD/5: rRNA
RNA family global rRNA
Volume 542.28 Å3
Hydrophobicity 0.513
Hydrophilicity 1.277
Buriedness 0.775
Don/acc character 0.968
SiteScore 1.202
D Score 0.989
Kd