HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4u6f

System information

Experimental technique X-ray
Experimental resolution 3.10
System mass 6631.36 kDa
Deposition year 2014
Molecule type RNA/Protein
# RNA entities 1
Organism Saccharomyces
RCSB PDB Entry 4u6f
Reference Garreau de Loubresse Nicolas, Prokhorova Irina, Holtkamp Wolf, Rodnina Marina V., Yusupova Gulnara, Yusupov Marat. . Structural basis for the inhibition of the eukaryotic ribosome Nature
Equivalence Class NR_all_90506.85
BGSU version: 4.48

Compound ZBA
Residue . / 4206
Chain RVA / 1
Non-redundant True
Interacting RNA chains JA/1
RNA environment detailled ion
RNA environment global RNA
RNA family chains JA/1: rRNA
RNA family global rRNA
Volume 619.12 Å3
Hydrophobicity 0.439
Hydrophilicity 1.393
Buriedness 0.788
Don/acc character 0.985
SiteScore 1.210
D Score 0.959
Kd

Compound ZBA
Residue . / 4256
Chain WUC / 5
Non-redundant True
Interacting RNA chains KD/5
RNA environment detailled ion
RNA environment global RNA
RNA family chains KD/5: rRNA
RNA family global rRNA
Volume 443.16 Å3
Hydrophobicity 0.751
Hydrophilicity 1.117
Buriedness 0.788
Don/acc character 1.639
SiteScore 1.112
D Score 0.923
Kd