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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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1146 RNA-SM complexes found
Structure of complex 1xmo

1xmo

Crystal Structure of mnm5U34t6A37-tRNALysUUU Complexed with AAG-mRNA in the Decoding Center

SM: PAR

Structure of complex 1xnq

1xnq

Structure of an Inosine-Adenine Wobble Base Pair Complex in the Context of the Decoding Center

SM: PAR

Structure of complex 1xnr

1xnr

Crystal Structure of an Inosine-Cytosine Wobble Base Pair in the Context of the Decoding Center

SM: PAR

Structure of complex 1xpf

1xpf

HIV-1 subtype A genomic RNA Dimerization Initiation Site

SM: SPM

Structure of complex 1yi2

1yi2

Crystal Structure Of Erythromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui

SM: ERY

Structure of complex 1yjn

1yjn

Crystal Structure Of Clindamycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui

SM: CLY

Structure of complex 1ykv

1ykv

Crystal structure of the Diels-Alder ribozyme complexed with the product of the reaction between N-pentylmaleimide and covalently attached 9-hydroxymethylanthracene

SM: DAI DAI

Structure of complex 1yls

1yls

Crystal structure of selenium-modified Diels-Alder ribozyme complexed with the product of the reaction between N-pentylmaleimide and covalently attached 9-hydroxymethylanthracene

SM: DAI DAI

Structure of complex 1yrj

1yrj

Crystal Structure of Apramycin bound to a Ribosomal RNA A site oligonucleotide

SM: AM2 AM2

Structure of complex 1z58

1z58

Crystal structure of a complex of the ribosome large subunit with rapamycin

SM: RAP

Structure of complex 1zz5

1zz5

Molecular Recognition of RNA by Neomycin and a Restricted Neomycin Derivative

SM: CNY CNY CNY CNY

Structure of complex 21cc

21cc

A solution NMR model of L-RNA r(UAGGGUUAGGGU) bounding Protoporphyrin IX ligand

SM: PP9

Structure of complex 23jz

23jz

pre-miR-6074 internal loop in complex with amiloride (Form 1)

SM: AMR

Structure of complex 23ka

23ka

pre-miR-6074 internal loop in complex with amiloride (Form 2)

SM: AMR AMR

Structure of complex 28jw

28jw

Structure of the Chlamydomonas reinhardtii chlororibosome with P-site tRNA

SM: CLM

Structure of complex 29iw

29iw

Human monosomes with bound toxin NT-2, focus on 60S subunit. Cells treated with NT-2.

SM: A1JQ4 ATP

Structure of complex 29ix

29ix

Human monosomes with bound toxin NT-2, focus on 60S subunit. NT-2 added to purified ribosomes as control.

SM: A1JQ4 ATP SPM SPM SPM SPM

Structure of complex 29iy

29iy

Human monosomes, focus on 60S subunit; control.

SM: ATP SPM SPM SPM SPM SPM

Structure of complex 29iz

29iz

Dormant 80S:eEF2:SERBP1:tRNA complex from human cells treated with toxin NT-2

SM: A1JQ4 SPM SPM SPM SPM SPM

Structure of complex 2a04

2a04

Molecular Recognition of RNA by Neomycin and a Restricted Neomycin Derivative

SM: NMY NMY NMY NMY

Structure of complex 2au4

2au4

Class I GTP aptamer

SM: GTP

Structure of complex 2be0

2be0

Complex Between Paromomycin Derivative JS5-39 and the 16S-Rrna A-Site.

SM: JS5 JS5

Structure of complex 2bee

2bee

Complex Between Paromomycin derivative JS4 and the 16S-Rrna A Site

SM: JS4 JS4

Structure of complex 2cky

2cky

Structure of the Arabidopsis thaliana thiamine pyrophosphate riboswitch with its regulatory ligand

SM: TPP TPP

Structure of complex 2esi

2esi

Complex between Kanamycin A and the 16S-Rrna A Site.

SM: KAN KAN KAN

Structure of complex 2esj

2esj

Complex between Lividomycin A and the 16S-Rrna A Site

SM: LIV LIV

Structure of complex 2et3

2et3

Complex Between Gentamicin C1A and the 16S-RRNA A-Site

SM: LLL LLL

Structure of complex 2et4

2et4

Complex Between Neomycin B and the 16S-RRNA A-Site

SM: NMY NMY

Structure of complex 2et8

2et8

Complex Between Neamine and the 16S-RRNA A-Site

SM: XXX

Structure of complex 2f4s

2f4s

A-site RNA in complex with neamine

SM: XXX

Structure of complex 2f4t

2f4t

Asite RNA + designer antibiotic

SM: AB9

Structure of complex 2f4u

2f4u

Asite RNA + designer antibiotic

SM: AB6

Structure of complex 2f4v

2f4v

30S ribosome + designer antibiotic

SM: AB9 D2C

Structure of complex 2g5k

2g5k

Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site complexed with Apramycin

SM: AM2 AM2

Structure of complex 2gdi

2gdi

Crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphate

SM: TPP TPP

Structure of complex 2gis

2gis

Structure of the S-adenosylmethionine riboswitch mRNA regulatory element

SM: SAM

Structure of complex 2hhh

2hhh

Crystal structure of kasugamycin bound to the 30S ribosomal subunit

SM: KSG KSG

Structure of complex 2ho7

2ho7

Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme bound to glucose-6-phosphate

SM: G6P

Structure of complex 2hoj

2hoj

Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ions

SM: TPP

Structure of complex 2hol

2hol

Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, barium ions

SM: TPP

Structure of complex 2hom

2hom

Crystal structure of an E. coli thi-box riboswitch bound to thiamine monophosphate

SM: TPS

Structure of complex 2hoo

2hoo

Crystal structure of an E. coli thi-box riboswitch bound to benfotiamine

SM: BFT

Structure of complex 2hop

2hop

Crystal structure of an E. coli thi-box riboswitch bound to pyrithiamine

SM: 218

Structure of complex 2juk

2juk

guanidino neomycin B recognition of an HIV-1 RNA helix

SM: G0B

Structure of complex 2kd4

2kd4

Solution structure and thermodynamics of 2',5' RNA intercalation

SM: PRL PRL

Structure of complex 2kgp

2kgp

Structural basis for stabilization of the tau pre-mRNA splicing regulatory element by Novantrone (Mitoxantrone)

SM: MIX

Structure of complex 2ktz

2ktz

Inhibitor Induced Structural Change in the HCV IRES Domain IIa RNA

SM: ISH

Structure of complex 2ku0

2ku0

Inhibitor Induced Structural Change in the HCV IRES Domain IIa RNA

SM: ISI

Structure of complex 2kx8

2kx8

NMR structure of stem-loop 4 from the human 7SK snRNA in complex with arginine

SM: ARG

Structure of complex 2kxm

2kxm

Solution NMR Structure of the 27 nucleotide engineered neomycin sensing riboswitch RNA-ribostmycin complex

SM: RIO

Structure of complex 2l1v

2l1v

Solution structure of a preQ1 riboswitch (Class I) aptamer bound to preQ1

SM: PRF

Structure of complex 2l94

2l94

Structure of the HIV-1 frameshift site RNA bound to a small molecule inhibitor of viral replication

SM: L94

Structure of complex 2lwk

2lwk

Solution structure of small molecule-influenza RNA complex

SM: 0EC

Structure of complex 2m4q

2m4q

NMR structure of E. coli ribosomela decoding site with apramycin

SM: AM2

Structure of complex 2miy

2miy

Solution NMR structure of a preQ1 Class II riboswitch from Streptococcus pneumoniae

SM: PRF

Structure of complex 2mxs

2mxs

Solution NMR-structure of the neomycin sensing riboswitch RNA bound to paromomycin

SM: PAR

Structure of complex 2n0j

2n0j

Solution NMR Structure of the 27 nucleotide engineered neomycin sensing riboswitch RNA-ribostamycin complex

SM: RIO

Structure of complex 2nz4

2nz4

Structural investigation of the GlmS ribozyme bound to its catalytic cofactor

SM: GLP GLP GLP GLP

Structure of complex 2o3v

2o3v

Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site complexed with paromamine derivative NB33

SM: N33

Structure of complex 2o3w

2o3w

Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site in presence of paromomycin

SM: PAR