HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Compound TPS

Identifiers

  • Canonical SMILES:
    Cc1ncc(C[n+]2csc(CCO[P](O)(O)=O)c2C)c(N)n1
  • IUPAC name:
    3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-5-[2-(phosphonooxy)ethyl]-1,3-thiazol-3-ium
  • InChi:
    InChI=1S/C12H17N4O4PS/c1-8-11(3-4-20-21(17,18)19)22-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7H,3-4,6H2,1-2H3,(H3-,13,14,15,17,18,19)/p+1
  • InChiKey:
    HZSAJDVWZRBGIF-UHFFFAOYSA-O

Chemistry rules

Lipinski's RO5 Veber Pfizer's 3/75

External links

RNA-SM complexes

PDB code Deposition date Reference publication
2hom July 14, 2006 Edwards Thomas E., Ferré-D'Amaré Adrian R.. . Crystal Structures of the Thi-Box Riboswitch Bound to Thiamine Pyrophosphate Analogs Reveal Adaptive RNA-Small Molecule Recognition Structure

Physicochemical filters

Descriptor Lipinski's RO5 Veber Pfizer's 3/75
Compliance
MW 345.08 g/mol
HBA 6
HBD 3
HBA + HBD
AlogP 0.72
TPSA 122.44
RB 6

Radar chart