Complex 1zz5
System information
Experimental technique | X-ray |
Experimental resolution | 3.00 |
System mass | 21.00 kDa |
Deposition year | 2005 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | N/A |
RCSB PDB Entry | 1zz5 |
Reference | Zhao Fang, Zhao Qiang, Blount Kenneth F., Han Qing, Tor Yitzhak, Hermann Thomas. . Molecular Recognition of RNA by Neomycin and a Restricted Neomycin Derivative Angewandte Chemie International Edition |
Compound | CNY |
Residue | . / 42 |
Chain | F / A |
Non-redundant | True |
Interacting RNA chains | A/A, B/B |
Volume | 57.62 Å3 |
Hydrophobicity | 0.212 |
Hydrophilicity | 0.800 |
Buriedness | 0.541 |
Don/acc character | 5.025 |
SiteScore | 0.567 |
D Score | 0.524 |
Compound | CNY |
Residue | . / 43 |
Chain | G / A |
Non-redundant | True |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | CNY |
Residue | . / 41 |
Chain | H / C |
Non-redundant | True |
Interacting RNA chains | D/D, C/C |
Volume | 45.96 Å3 |
Hydrophobicity | 0.152 |
Hydrophilicity | 0.911 |
Buriedness | 0.547 |
Don/acc character | 3.628 |
SiteScore | 0.557 |
D Score | 0.501 |
Compound | CNY |
Residue | . / 44 |
Chain | I / C |
Non-redundant | True |
Interacting RNA chains | A/A, B/B, C/C |
Volume | 74.77 Å3 |
Hydrophobicity | 0.063 |
Hydrophilicity | 1.079 |
Buriedness | 0.651 |
Don/acc character | 1.199 |
SiteScore | 0.519 |
D Score | 0.403 |