Complex 1yls
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.00 |
| System mass | 33.54 kDa |
| Deposition year | 2005 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 1yls |
| Reference | Serganov Alexander, Keiper Sonja, Malinina Lucy, Tereshko Valentina, Skripkin Eugene, Höbartner Claudia, Polonskaia Anna, Phan Anh Tuân, Wombacher Richard, Micura Ronald, Dauter Zbigniew, Jäschke Andres, Patel Dinshaw J. . Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation Nature Structural & Molecular Biology |
| Compound | DAI |
| Residue | . / 100 |
| Chain | E / A |
| Non-redundant | True |
| Interacting RNA chains | B/B, A/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/A: ribozyme, B/B: ribozyme |
| RNA family global | ribozyme |
| Volume | 609.17 Å3 |
| Hydrophobicity | 1.099 |
| Hydrophilicity | 0.764 |
| Buriedness | 0.734 |
| Don/acc character | 1.578 |
| SiteScore | 1.228 |
| D Score | 1.132 |
| Kd | — |
| Compound | DAI |
| Residue | . / 100 |
| Chain | M / C |
| Non-redundant | True |
| Interacting RNA chains | D/D, C/C |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | C/C: ribozyme, D/D: ribozyme |
| RNA family global | ribozyme |
| Volume | 619.80 Å3 |
| Hydrophobicity | 0.977 |
| Hydrophilicity | 0.795 |
| Buriedness | 0.720 |
| Don/acc character | 1.208 |
| SiteScore | 1.212 |
| D Score | 1.113 |
| Kd | — |