HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2cky

System information

Experimental technique X-ray
Experimental resolution 2.90
System mass 53.29 kDa
Deposition year 2006
Molecule type RNA
# RNA entities 1
Organism Arabidopsis
RCSB PDB Entry 2cky
Reference Thore Stéphane, Leibundgut Marc, Ban Nenad. . Structure of the Eukaryotic Thiamine Pyrophosphate Riboswitch with Its Regulatory Ligand Science

Compound TPP
Residue . / 1084
Chain I / A
Non-redundant False
Interacting RNA chains A/A
RNA environment detailled ion
RNA environment global RNA
RNA family chains A/A: riboswitch
RNA family global riboswitch
Volume 773.47 Å3
Hydrophobicity 0.356
Hydrophilicity 1.065
Buriedness 0.738
Don/acc character 1.291
SiteScore 1.177
D Score 1.036
Kd

Compound TPP
Residue . / 1082
Chain R / B
Non-redundant False
Interacting RNA chains B/B
RNA environment detailled ion
RNA environment global RNA
RNA family chains B/B: riboswitch
RNA family global riboswitch
Volume 274.06 Å3
Hydrophobicity 0.457
Hydrophilicity 0.890
Buriedness 0.788
Don/acc character 2.296
SiteScore 0.945
D Score 0.754
Kd