HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2o3v

System information

Experimental technique X-ray
Experimental resolution 2.80
System mass 15.23 kDa
Deposition year 2006
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 2o3v
Reference Kondo Jiro, Hainrichson Mariana, Nudelman Igor, Shallom‐Shezifi Dalia, Barbieri Christopher M., Pilch Daniel S., Westhof Eric, Baasov Timor. . Differential Selectivity of Natural and Synthetic Aminoglycosides towards the Eukaryotic and Prokaryotic Decoding A Sites ChemBioChem
Equivalence Class NR_all_48589.1
BGSU version: 4.48

Compound N33
Residue . / 50
Chain C / A
Non-redundant True
Interacting RNA chains B/B, A/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: rRNA, B/B: rRNA
RNA family global rRNA
Volume 240.79 Å3
Hydrophobicity 0.223
Hydrophilicity 0.842
Buriedness 0.654
Don/acc character 3.238
SiteScore 0.834
D Score 0.641
Kd