HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2f4v

System information

Experimental technique X-ray
Experimental resolution 3.80
System mass 781.87 kDa
Deposition year 2005
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 2f4v
Reference Murray James B., Meroueh Samy O., Russell Rupert J.M., Lentzen Georg, Haddad Jalal, Mobashery Shahriar. . Interactions of Designer Antibiotics and the Bacterial Ribosomal Aminoacyl-tRNA Site Chemistry & Biology

Compound AB9
Residue . / 1637
Chain CE / A
Non-redundant False
Interacting RNA chains A/A, B/Z
RNA environment detailled ion
RNA environment global RNA
RNA family chains A/A: rRNA, B/Z: rRNA
RNA family global rRNA
Volume 93.30 Å3
Hydrophobicity 0.091
Hydrophilicity 0.920
Buriedness 0.581
Don/acc character 4.220
SiteScore 0.796
D Score 0.605
Kd

Compound D2C
Residue . / 1636
Chain BE / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled ion
RNA environment global RNA
RNA family chains A/A: rRNA
RNA family global rRNA
Volume 157.44 Å3
Hydrophobicity 0.153
Hydrophilicity 1.112
Buriedness 0.717
Don/acc character 1.009
SiteScore 0.958
D Score 0.746
Kd