Complex 1yrj
System information
Experimental technique | X-ray |
Experimental resolution | 2.70 |
System mass | 15.85 kDa |
Deposition year | 2005 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | N/A |
RCSB PDB Entry | 1yrj |
Reference | Han Qing, Zhao Qiang, Fish Sarah, Simonsen Klaus B., Vourloumis Dionisios, Froelich Jamie M., Wall Daniel, Hermann Thomas. . Molecular Recognition by Glycoside Pseudo Base Pairs and Triples in an Apramycin–RNA Complex Angewandte Chemie International Edition |
Compound | AM2 |
Residue | . / 151 |
Chain | C / A |
Non-redundant | True |
Interacting RNA chains | B/B, A/A |
Volume | 119.71 Å3 |
Hydrophobicity | 0.226 |
Hydrophilicity | 0.872 |
Buriedness | 0.577 |
Don/acc character | 2.631 |
SiteScore | 0.694 |
D Score | 0.671 |
Compound | AM2 |
Residue | . / 150 |
Chain | E / B |
Non-redundant | True |
Interacting RNA chains | B/B, A/A |
Volume | 348.49 Å3 |
Hydrophobicity | 0.104 |
Hydrophilicity | 1.056 |
Buriedness | 0.632 |
Don/acc character | 1.775 |
SiteScore | 0.890 |
D Score | 0.891 |