Complex 2a04
System information
Experimental technique | X-ray |
Experimental resolution | 2.95 |
System mass | 21.08 kDa |
Deposition year | 2005 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | N/A |
RCSB PDB Entry | 2a04 |
Reference | Zhao Fang, Zhao Qiang, Blount Kenneth F., Han Qing, Tor Yitzhak, Hermann Thomas. . Molecular Recognition of RNA by Neomycin and a Restricted Neomycin Derivative Angewandte Chemie International Edition |
Compound | NMY |
Residue | . / 17 |
Chain | E / A |
Non-redundant | True |
Interacting RNA chains | B/B, A/A |
Volume | 61.05 Å3 |
Hydrophobicity | 0.164 |
Hydrophilicity | 0.864 |
Buriedness | 0.556 |
Don/acc character | 3.366 |
SiteScore | 0.633 |
D Score | 0.600 |
Compound | NMY |
Residue | . / 18 |
Chain | F / A |
Non-redundant | True |
Interacting RNA chains | A/A |
Volume | 93.64 Å3 |
Hydrophobicity | 0.081 |
Hydrophilicity | 1.265 |
Buriedness | 0.696 |
Don/acc character | 0.956 |
SiteScore | 0.509 |
D Score | 0.317 |
Compound | NMY |
Residue | . / 1 |
Chain | H / C |
Non-redundant | True |
Interacting RNA chains | C/C, D/D |
Volume | 183.50 Å3 |
Hydrophobicity | 0.017 |
Hydrophilicity | 1.099 |
Buriedness | 0.660 |
Don/acc character | 2.226 |
SiteScore | 0.616 |
D Score | 0.517 |
Compound | NMY |
Residue | . / 17 |
Chain | I / C |
Non-redundant | True |
Interacting RNA chains | B/B, A/A, C/C |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |