HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2et4

System information

Experimental technique X-ray
Experimental resolution 2.40
System mass 15.33 kDa
Deposition year 2005
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 2et4
Reference Francois B.. . Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding Nucleic Acids Research

Compound NMY
Residue . / 50
Chain C / A
Non-redundant True
Interacting RNA chains A/A, B/B
Volume 152.29 Å3
Hydrophobicity 0.010
Hydrophilicity 1.149
Buriedness 0.642
Don/acc character 1.677
SiteScore 0.618
D Score 0.508

Compound NMY
Residue . / 51
Chain D / B
Non-redundant True
Interacting RNA chains A/A, B/B
Volume 93.98 Å3
Hydrophobicity 0.110
Hydrophilicity 0.765
Buriedness 0.534
Don/acc character 3.449
SiteScore 0.680
D Score 0.673