HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2et4

System information

Experimental technique X-ray
Experimental resolution 2.40
System mass 15.33 kDa
Deposition year 2005
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 2et4
Reference Francois B.. . Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding Nucleic Acids Research

Compound NMY
Residue . / 50
Chain C / A
Non-redundant True
Interacting RNA chains B/B, A/A
Volume 63.46 Å3
Hydrophobicity 0.144
Hydrophilicity 0.921
Buriedness 0.564
Don/acc character 3.604
SiteScore 0.702
D Score 0.489

Compound NMY
Residue . / 51
Chain D / B
Non-redundant True
Interacting RNA chains B/B, A/A
Volume 95.01 Å3
Hydrophobicity 0.107
Hydrophilicity 0.750
Buriedness 0.532
Don/acc character 3.794
SiteScore 0.820
D Score 0.662