Complex 2esj
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.20 |
| System mass | 15.62 kDa |
| Deposition year | 2005 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 2esj |
| Reference | Francois B.. . Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding Nucleic Acids Research |
| Compound | LIV |
| Residue | . / 50 |
| Chain | C / A |
| Non-redundant | True |
| Interacting RNA chains | B/B, A/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/A: rRNA, B/B: rRNA |
| RNA family global | rRNA |
| Volume | 78.20 Å3 |
| Hydrophobicity | 0.216 |
| Hydrophilicity | 0.915 |
| Buriedness | 0.599 |
| Don/acc character | 3.554 |
| SiteScore | 0.763 |
| D Score | 0.558 |
| Kd | — |
| Compound | LIV |
| Residue | . / 51 |
| Chain | D / B |
| Non-redundant | True |
| Interacting RNA chains | B/B, A/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/A: rRNA, B/B: rRNA |
| RNA family global | rRNA |
| Volume | 110.10 Å3 |
| Hydrophobicity | 0.151 |
| Hydrophilicity | 0.884 |
| Buriedness | 0.577 |
| Don/acc character | 1.828 |
| SiteScore | 0.939 |
| D Score | 0.792 |
| Kd | — |