HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2et3

System information

Experimental technique X-ray
Experimental resolution 2.80
System mass 15.00 kDa
Deposition year 2005
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 2et3
Reference Francois B.. . Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding Nucleic Acids Research

Compound LLL
Residue . / 50
Chain C / A
Non-redundant True
Interacting RNA chains A/A, B/B
Volume 74.77 Å3
Hydrophobicity 0.050
Hydrophilicity 0.983
Buriedness 0.583
Don/acc character 3.620
SiteScore 0.710
D Score 0.490

Compound LLL
Residue . / 51
Chain D / B
Non-redundant True
Interacting RNA chains A/A, B/B
Volume 101.19 Å3
Hydrophobicity 0.136
Hydrophilicity 0.859
Buriedness 0.556
Don/acc character 2.507
SiteScore 0.778
D Score 0.594