HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2nz4

System information

Experimental technique X-ray
Experimental resolution 2.50
System mass 244.40 kDa
Deposition year 2006
Molecule type RNA/Protein
# RNA entities 2
Organism Bacillus
RCSB PDB Entry 2nz4
Reference Cochrane Jesse C., Lipchock Sarah V., Strobel Scott A.. . Structural Investigation of the GlmS Ribozyme Bound to Its Catalytic Cofactor Chemistry & Biology

Compound GLP
Residue . / 5001
Chain M / P
Non-redundant True
Interacting RNA chains A/E, B/P
Volume 369.07 Å3
Hydrophobicity 0.154
Hydrophilicity 1.481
Buriedness 0.766
Don/acc character 0.732
SiteScore 1.046
D Score 0.917

Compound GLP
Residue . / 5002
Chain R / F
Non-redundant True
Interacting RNA chains D/Q, C/F
Volume 571.44 Å3
Hydrophobicity 0.174
Hydrophilicity 1.509
Buriedness 0.773
Don/acc character 0.919
SiteScore 1.050
D Score 0.912

Compound GLP
Residue . / 5003
Chain W / G
Non-redundant False
Interacting RNA chains F/R, E/G
Volume 393.42 Å3
Hydrophobicity 0.041
Hydrophilicity 1.664
Buriedness 0.796
Don/acc character 0.714
SiteScore 1.065
D Score 0.875

Compound GLP
Residue . / 5004
Chain BA / H
Non-redundant False
Interacting RNA chains H/S, G/H
Volume 373.87 Å3
Hydrophobicity 0.161
Hydrophilicity 1.393
Buriedness 0.729
Don/acc character 0.685
SiteScore 1.021
D Score 0.923