Complex 1ykv
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.30 |
| System mass | 32.44 kDa |
| Deposition year | 2005 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 1ykv |
| Reference | Serganov Alexander, Keiper Sonja, Malinina Lucy, Tereshko Valentina, Skripkin Eugene, Höbartner Claudia, Polonskaia Anna, Phan Anh Tuân, Wombacher Richard, Micura Ronald, Dauter Zbigniew, Jäschke Andres, Patel Dinshaw J. . Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation Nature Structural & Molecular Biology |
| Compound | DAI |
| Residue | . / 100 |
| Chain | E / A |
| Non-redundant | True |
| Interacting RNA chains | A/A, B/B |
| Volume | 501.81 Å3 |
| Hydrophobicity | 0.791 |
| Hydrophilicity | 0.947 |
| Buriedness | 0.727 |
| Don/acc character | 1.192 |
| SiteScore | 1.038 |
| D Score | 1.067 |
| Compound | DAI |
| Residue | . / 100 |
| Chain | J / C |
| Non-redundant | False |
| Interacting RNA chains | C/C, D/D |
| Volume | 548.11 Å3 |
| Hydrophobicity | 0.749 |
| Hydrophilicity | 0.930 |
| Buriedness | 0.705 |
| Don/acc character | 1.345 |
| SiteScore | 1.026 |
| D Score | 1.060 |