Complex 1ykv
System information
Experimental technique | X-ray |
Experimental resolution | 3.30 |
System mass | 32.44 kDa |
Deposition year | 2005 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | N/A |
RCSB PDB Entry | 1ykv |
Reference | Serganov Alexander, Keiper Sonja, Malinina Lucy, Tereshko Valentina, Skripkin Eugene, Höbartner Claudia, Polonskaia Anna, Phan Anh Tuân, Wombacher Richard, Micura Ronald, Dauter Zbigniew, Jäschke Andres, Patel Dinshaw J. . Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation Nature Structural & Molecular Biology |
Compound | DAI |
Residue | . / 100 |
Chain | E / A |
Non-redundant | True |
Interacting RNA chains | A/A, B/B |
Volume | 501.81 Å3 |
Hydrophobicity | 0.791 |
Hydrophilicity | 0.947 |
Buriedness | 0.727 |
Don/acc character | 1.192 |
SiteScore | 1.038 |
D Score | 1.067 |
Compound | DAI |
Residue | . / 100 |
Chain | J / C |
Non-redundant | False |
Interacting RNA chains | C/C, D/D |
Volume | 548.11 Å3 |
Hydrophobicity | 0.749 |
Hydrophilicity | 0.930 |
Buriedness | 0.705 |
Don/acc character | 1.345 |
SiteScore | 1.026 |
D Score | 1.060 |