Complex 1ykv
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.30 |
| System mass | 32.44 kDa |
| Deposition year | 2005 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 1ykv |
| Reference | Serganov Alexander, Keiper Sonja, Malinina Lucy, Tereshko Valentina, Skripkin Eugene, Höbartner Claudia, Polonskaia Anna, Phan Anh Tuân, Wombacher Richard, Micura Ronald, Dauter Zbigniew, Jäschke Andres, Patel Dinshaw J. . Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation Nature Structural & Molecular Biology |
| Compound | DAI |
| Residue | . / 100 |
| Chain | E / A |
| Non-redundant | True |
| Interacting RNA chains | B/B, A/A |
| Volume | 497.35 Å3 |
| Hydrophobicity | 0.857 |
| Hydrophilicity | 0.861 |
| Buriedness | 0.724 |
| Don/acc character | 0.686 |
| SiteScore | 1.052 |
| D Score | 1.094 |
| Compound | DAI |
| Residue | . / 100 |
| Chain | J / C |
| Non-redundant | False |
| Interacting RNA chains | D/D, C/C |
| Volume | 543.31 Å3 |
| Hydrophobicity | 0.722 |
| Hydrophilicity | 0.884 |
| Buriedness | 0.712 |
| Don/acc character | 0.864 |
| SiteScore | 1.040 |
| D Score | 1.079 |