HARIBOSS - RNA-SM complexes list

4e8t

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and an oligonucleotide fragment substrate (low energy dataset)

SM: EPE EPE EPE EPE EPE SPM SPM

4e8v

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Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+

SM: EPE EPE EPE EPE

4b5r

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SAM-I riboswitch bearing the H. marismortui K-t-7

SM: SAM

4f8u

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Crystal structure of the bacterial ribosomal decoding site in complex with sisomicin (C2 form)

SM: SIS SIS

4f8v

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Crystal structure of the bacterial ribosomal decoding site in complex with sisomicin (P21212 form)

SM: SIS SIS

4faq

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and 5'-exon

SM: EPE EPE EPE EPE EPE SPM SPM

4far

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon

SM: EPE EPE EPE SPM SPM

4e8k

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and a non-hydrolyzed oligonucleotide substrate

SM: EPE EPE EPE EPE EPE SPM

4e8m

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Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Mg2+

SM: EPE EPE EPE EPE EPE SPM SPM

4e8n

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Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of NH4+ and Mg2+

SM: EPE EPE SPM

4e8p

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Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Rb+ and Mg2+

SM: EPE EPE EPE EPE SPM

4e8q

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Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Tl+ and Mg2+

SM: EPE EPE EPE SPM

4e8r

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Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Cs+ and Mg2+

SM: EPE EPE EPE EPE

4gpy

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Crystal structure of the bacterial ribosomal decoding site in complex with 6'-hydroxysisomicin

SM: 6HS 6HS

4fau

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Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+ and 5'-exon

SM: EPE EPE EPE SPM

4faw

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and a hydrolyzed oligonucleotide fragment

SM: EPE EPE SPM

4fax

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Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Na+ and Mg2+

SM: EPE EPE EPE

4fb0

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Structure of Oceanobacillus iheyensis group II intron C377G mutant in a ligand-free state in the presence of K+ and Mg2+

SM: EPE EPE EPE EPE SPM

4gpw

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Crystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P21212 form)

SM: 6HS 6HS

4gpx

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Crystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P212121 form)

SM: 6HS 6HS

4jf2

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Structure of a class II preQ1 riboswitch reveals ligand recognition by a new fold

SM: PRF

4k31

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Crystal structure of apramycin bound to the leishmanial rRNA A-site

SM: AM2 AM2 AM2 AM2

4k32

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Crystal structure of geneticin bound to the leishmanial rRNA A-site

SM: GET GET

4nfo

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Crystal Structure Analysis of the 16mer GCAGACUUAAGUCUGC

SM: SPM

4qk8

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Thermoanaerobacter pseudethanolicus c-di-AMP riboswitch

SM: 2BA 2BA

4qk9

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Thermovirga lienii c-di-AMP riboswitch

SM: 2BA 2BA

4kqy

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Bacillus subtilis yitJ S box/SAM-I riboswitch

SM: SAM

4l81

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Structure of the SAM-I/IV riboswitch (env87(deltaU92, deltaG93))

SM: SAM

4lvv

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Structure of the THF riboswitch

SM: FFO FFO

4lvx

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Structure of the THF riboswitch bound to tetrahydrobiopterin

SM: H4B H4B

4lvy

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Structure of the THF riboswitch bound to pemetrexed

SM: LYA LYA

4lx5

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X-ray crystal structure of the M6" riboswitch aptamer bound to pyrimido[4,5-d]pyrimidine-2,4-diamine (PPDA)

SM: 29G

4lx6

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X-ray crystal structure of the M6C" riboswitch aptamer bound to 2-aminopyrimido[4,5-d]pyrimidin-4(3H)-one (PPAO)

SM: 29H

4nya

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Crystal structure of the E. coli thiM riboswitch in complex with 5-(azidomethyl)-2-methylpyrimidin-4-amine

SM: 2QB 2QB

4nyb

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Crystal structure of the E. coli thiM riboswitch in complex with (4-(1,2,3-thiadiazol-4-yl)phenyl)methanamine

SM: 2QC

4nyg

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Crystal structure of the E. coli thiM riboswitch in complex with thiamine

SM: VIB

4oqu

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Structure of the SAM-I/IV riboswitch (env87(deltaU92))

SM: SAM

4p20

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Crystal structures of the bacterial ribosomal decoding site complexed with amikacin

SM: AKN AKN

4p3s

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Crystal structure of the bacterial A1408C-mutant ribosomal decoding site in complex with geneticin

SM: GET GET GET

4p5j

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Crystal structure of the tRNA-like structure from Turnip Yellow Mosaic Virus (TYMV), a tRNA mimicking RNA

SM: SPM

4pdq

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Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neomycin analog

SM: NMZ

4qka

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c-di-AMP riboswitch from Thermoanaerobacter pseudethanolicus, iridium hexamine soak

SM: 2BA 2BA

4qlm

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ydao riboswitch binding to c-di-AMP

SM: 2BA 2BA

4qln

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structure of ydao riboswitch binding with c-di-dAMP

SM: 2BA 2BA

4r0d

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Crystal structure of a eukaryotic group II intron lariat

SM: SPM SPM

4rzd

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Crystal Structure of a PreQ1 Riboswitch

SM: PRF

4ts0

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Crystal structure of the Spinach RNA aptamer in complex with DFHBI, barium ions

SM: 38E

4ts2

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Crystal structure of the Spinach RNA aptamer in complex with DFHBI, magnesium ions

SM: 38E

4xw7

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Crystal structure of the ZMP riboswitch at 2.50 angstrom

SM: AMZ

4xwf

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Crystal structure of the ZMP riboswitch at 1.80 angstrom

SM: AMZ

4y1i

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Lactococcus lactis yybP-ykoY Mn riboswitch bound to Mn2+

SM: GTP GTP

4y1j

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Lactococcus lactis yybP-ykoY Mn riboswitch A41U binding site mutant in presence of Mn2+

SM: GTP GTP

4y1m

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An Escherichia coli yybP-ykoY Mn riboswitch in the Mn2+-free state

SM: GTP GTP

4yaz

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3',3'-cGAMP riboswitch bound with 3',3'-cGAMP

SM: 4BW 4BW

4yb0

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3',3'-cGAMP riboswitch bound with c-di-GMP

SM: C2E C2E

4zc7

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Paromomycin bound to a leishmanial ribosomal A-site

SM: PAR PAR

4znp

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The structure of A pfI Riboswitch Bound to ZMP

SM: AMZ AMZ

5bjo

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Crystal structure of the Corn RNA aptamer in complex with DFHO, site-specific 5-iodo-U

SM: 747

5bjp

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Crystal structure of the Corn RNA aptamer in complex with DFHO, iridium hexammine soak

SM: 747

5btp

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Fusobacterium ulcerans ZTP riboswitch bound to ZMP

SM: AMZ AMZ