Complex 4yaz
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.00 |
| System mass | 56.27 kDa |
| Deposition year | 2015 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Geobacter |
| RCSB PDB Entry | 4yaz |
| Reference | Ren Aiming, Wang Xin C., Kellenberger Colleen A., Rajashankar Kanagalaghatta R., Jones Roger A., Hammond Ming C., Patel Dinshaw J.. . Structural Basis for Molecular Discrimination by a 3′,3′-cGAMP Sensing Riboswitch Cell Reports |
| Equivalence Class |
NR_all_31480.3
BGSU version: 4.49 |
| Compound | 4BW |
| Residue | . / 106 |
| Chain | H / R |
| Non-redundant | True |
| Interacting RNA chains | A/R |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/R: riboswitch |
| RNA family global | riboswitch |
| Volume | 337.51 Å3 |
| Hydrophobicity | 0.199 |
| Hydrophilicity | 1.268 |
| Buriedness | 0.708 |
| Don/acc character | 0.764 |
| SiteScore | 0.568 |
| D Score | 0.942 |
| Kd | 66.7nM |
| Compound | 4BW |
| Residue | . / 103 |
| Chain | L / A |
| Non-redundant | True |
| Interacting RNA chains | B/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 234.27 Å3 |
| Hydrophobicity | 0.649 |
| Hydrophilicity | 0.982 |
| Buriedness | 0.734 |
| Don/acc character | 0.925 |
| SiteScore | 1.136 |
| D Score | 0.997 |
| Kd | 66.7nM |