Complex 5btp
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.82 |
| System mass | 49.40 kDa |
| Deposition year | 2015 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 5btp |
| Reference | Jones Christopher P, Ferré-D'Amaré Adrian R. . Recognition of the bacterial alarmone ZMP through long-distance association of two RNA subdomains Nature Structural & Molecular Biology |
| Equivalence Class |
NR_all_72776.5
BGSU version: 4.48 |
| Compound | AMZ |
| Residue | . / 108 |
| Chain | J / B |
| Non-redundant | True |
| Interacting RNA chains | A/B |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/B: riboswitch |
| RNA family global | riboswitch |
| Volume | 153.66 Å3 |
| Hydrophobicity | 0.399 |
| Hydrophilicity | 0.947 |
| Buriedness | 0.705 |
| Don/acc character | 2.333 |
| SiteScore | 0.847 |
| D Score | 0.646 |
| Kd | 487nM |
| Compound | AMZ |
| Residue | . / 106 |
| Chain | Q / A |
| Non-redundant | True |
| Interacting RNA chains | B/A |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | B/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 615.34 Å3 |
| Hydrophobicity | 0.120 |
| Hydrophilicity | 1.284 |
| Buriedness | 0.731 |
| Don/acc character | 1.282 |
| SiteScore | 1.172 |
| D Score | 0.960 |
| Kd | 487nM |