Complex 4e8t
System information
Experimental technique | X-ray |
Experimental resolution | 3.34 |
System mass | 133.50 kDa |
Deposition year | 2012 |
Molecule type | RNA |
# RNA entities | 2 |
Organism | Oceanobacillus |
RCSB PDB Entry | 4e8t |
Reference | Marcia Marco, Pyle Anna Marie. . Visualizing Group II Intron Catalysis through the Stages of Splicing Cell |
Compound | EPE |
Residue | . / 442 |
Chain | RA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 65.86 Å3 |
Hydrophobicity | 0.176 |
Hydrophilicity | 0.929 |
Buriedness | 0.519 |
Don/acc character | 8.273 |
SiteScore | 0.423 |
D Score | 0.334 |
Compound | EPE |
Residue | . / 444 |
Chain | TA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 37.04 Å3 |
Hydrophobicity | 0.257 |
Hydrophilicity | 0.759 |
Buriedness | 0.520 |
Don/acc character | 1.231 |
SiteScore | 0.366 |
D Score | 0.275 |
Compound | EPE |
Residue | . / 445 |
Chain | UA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 145.77 Å3 |
Hydrophobicity | 0.230 |
Hydrophilicity | 1.422 |
Buriedness | 0.696 |
Don/acc character | 1.512 |
SiteScore | 0.693 |
D Score | 0.502 |
Compound | EPE |
Residue | . / 446 |
Chain | VA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | EPE |
Residue | . / 447 |
Chain | WA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | SPM |
Residue | . / 440 |
Chain | PA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 201.00 Å3 |
Hydrophobicity | 0.166 |
Hydrophilicity | 1.144 |
Buriedness | 0.693 |
Don/acc character | 0.587 |
SiteScore | 0.672 |
D Score | 0.566 |
Compound | SPM |
Residue | . / 441 |
Chain | QA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 220.21 Å3 |
Hydrophobicity | 0.016 |
Hydrophilicity | 1.390 |
Buriedness | 0.684 |
Don/acc character | 1.100 |
SiteScore | 0.786 |
D Score | 0.635 |