HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4e8t

System information

Experimental technique X-ray
Experimental resolution 3.34
System mass 133.50 kDa
Deposition year 2012
Molecule type RNA
# RNA entities 2
Organism Oceanobacillus
RCSB PDB Entry 4e8t
Reference Marcia Marco, Pyle Anna Marie. . Visualizing Group II Intron Catalysis through the Stages of Splicing Cell

Compound EPE
Residue . / 444
Chain TA / A
Non-redundant False
Interacting RNA chains A/A
Volume 40.13 Å3
Hydrophobicity 0.000
Hydrophilicity 1.053
Buriedness 0.537
Don/acc character 7.876
SiteScore 0.286
D Score 0.141

Compound EPE
Residue . / 445
Chain UA / A
Non-redundant False
Interacting RNA chains A/A
Volume 150.23 Å3
Hydrophobicity 0.000
Hydrophilicity 1.307
Buriedness 0.656
Don/acc character 2.348
SiteScore 0.666
D Score 0.515

Compound EPE
Residue . / 446
Chain VA / A
Non-redundant False
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound EPE
Residue . / 447
Chain WA / A
Non-redundant False
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound SPM
Residue . / 440
Chain PA / A
Non-redundant False
Interacting RNA chains A/A
Volume 204.77 Å3
Hydrophobicity 0.231
Hydrophilicity 0.868
Buriedness 0.645
Don/acc character 1.201
SiteScore 0.639
D Score 0.584

Compound SPM
Residue . / 441
Chain QA / A
Non-redundant False
Interacting RNA chains A/A
Volume 229.47 Å3
Hydrophobicity 0.107
Hydrophilicity 0.882
Buriedness 0.640
Don/acc character 3.756
SiteScore 0.739
D Score 0.713