Complex 4e8t
System information
Experimental technique | X-ray |
Experimental resolution | 3.34 |
System mass | 133.50 kDa |
Deposition year | 2012 |
Molecule type | RNA |
# RNA entities | 2 |
Organism | Oceanobacillus |
RCSB PDB Entry | 4e8t |
Reference | Marcia Marco, Pyle Anna Marie. . Visualizing Group II Intron Catalysis through the Stages of Splicing Cell |
Compound | EPE |
Residue | . / 444 |
Chain | TA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 40.13 Å3 |
Hydrophobicity | 0.000 |
Hydrophilicity | 1.053 |
Buriedness | 0.537 |
Don/acc character | 7.876 |
SiteScore | 0.286 |
D Score | 0.141 |
Compound | EPE |
Residue | . / 445 |
Chain | UA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 150.23 Å3 |
Hydrophobicity | 0.000 |
Hydrophilicity | 1.307 |
Buriedness | 0.656 |
Don/acc character | 2.348 |
SiteScore | 0.666 |
D Score | 0.515 |
Compound | EPE |
Residue | . / 446 |
Chain | VA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | EPE |
Residue | . / 447 |
Chain | WA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | SPM |
Residue | . / 440 |
Chain | PA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 204.77 Å3 |
Hydrophobicity | 0.231 |
Hydrophilicity | 0.868 |
Buriedness | 0.645 |
Don/acc character | 1.201 |
SiteScore | 0.639 |
D Score | 0.584 |
Compound | SPM |
Residue | . / 441 |
Chain | QA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 229.47 Å3 |
Hydrophobicity | 0.107 |
Hydrophilicity | 0.882 |
Buriedness | 0.640 |
Don/acc character | 3.756 |
SiteScore | 0.739 |
D Score | 0.713 |