Complex 4yb0
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.12 |
| System mass | 56.14 kDa |
| Deposition year | 2015 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Geobacter |
| RCSB PDB Entry | 4yb0 |
| Reference | Ren Aiming, Wang Xin C., Kellenberger Colleen A., Rajashankar Kanagalaghatta R., Jones Roger A., Hammond Ming C., Patel Dinshaw J.. . Structural Basis for Molecular Discrimination by a 3′,3′-cGAMP Sensing Riboswitch Cell Reports |
| Equivalence Class |
NR_all_31480.3
BGSU version: 4.48 |
| Compound | C2E |
| Residue | . / 102 |
| Chain | D / R |
| Non-redundant | True |
| Interacting RNA chains | A/R |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/R: riboswitch |
| RNA family global | riboswitch |
| Volume | 347.12 Å3 |
| Hydrophobicity | 0.630 |
| Hydrophilicity | 0.936 |
| Buriedness | 0.684 |
| Don/acc character | 1.023 |
| SiteScore | 1.161 |
| D Score | 1.045 |
| Kd | 0.93uM |
| Compound | C2E |
| Residue | . / 102 |
| Chain | K / A |
| Non-redundant | True |
| Interacting RNA chains | B/A |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | B/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 380.04 Å3 |
| Hydrophobicity | 0.266 |
| Hydrophilicity | 1.228 |
| Buriedness | 0.739 |
| Don/acc character | 0.964 |
| SiteScore | 0.811 |
| D Score | 0.983 |
| Kd | 0.93uM |