Complex 4pdq
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.00 |
| System mass | 15.51 kDa |
| Deposition year | 2014 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 4pdq |
| Reference | Hanessian S., Saavedra O. M., Vilchis-Reyes M. A., Maianti J. P., Kanazawa H., Dozzo P., Matias R. D., Serio A., Kondo J.. . Synthesis, broad spectrum antibacterial activity, and X-ray co-crystal structure of the decoding bacterial ribosomal A-site with 4′-deoxy-4′-fluoro neomycin analogs Chem. Sci. |
| Compound | NMZ |
| Residue | . / 101 |
| Chain | D / B |
| Non-redundant | True |
| Interacting RNA chains | A/A, B/B |
| Volume | 42.87 Å3 |
| Hydrophobicity | 0.200 |
| Hydrophilicity | 0.708 |
| Buriedness | 0.572 |
| Don/acc character | 1.278 |
| SiteScore | 0.661 |
| D Score | 0.644 |