Complex 4e8q
System information
Experimental technique | X-ray |
Experimental resolution | 2.84 |
System mass | 133.24 kDa |
Deposition year | 2012 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | Oceanobacillus |
RCSB PDB Entry | 4e8q |
Reference | Marcia Marco, Pyle Anna Marie. . Visualizing Group II Intron Catalysis through the Stages of Splicing Cell |
Compound | EPE |
Residue | . / 449 |
Chain | XA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 77.17 Å3 |
Hydrophobicity | 0.018 |
Hydrophilicity | 1.210 |
Buriedness | 0.596 |
Don/acc character | 5.849 |
SiteScore | 0.492 |
D Score | 0.339 |
Compound | EPE |
Residue | . / 450 |
Chain | YA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | EPE |
Residue | . / 451 |
Chain | ZA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 41.85 Å3 |
Hydrophobicity | 0.000 |
Hydrophilicity | 1.129 |
Buriedness | 0.588 |
Don/acc character | 5.389 |
SiteScore | 0.400 |
D Score | 0.250 |
Compound | SPM |
Residue | . / 448 |
Chain | WA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 305.61 Å3 |
Hydrophobicity | 0.131 |
Hydrophilicity | 0.876 |
Buriedness | 0.587 |
Don/acc character | 1.990 |
SiteScore | 0.682 |
D Score | 0.654 |