HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4e8q

System information

Experimental technique X-ray
Experimental resolution 2.84
System mass 133.24 kDa
Deposition year 2012
Molecule type RNA
# RNA entities 1
Organism Oceanobacillus
RCSB PDB Entry 4e8q
Reference Marcia Marco, Pyle Anna Marie. . Visualizing Group II Intron Catalysis through the Stages of Splicing Cell

Compound EPE
Residue . / 449
Chain XA / A
Non-redundant False
Interacting RNA chains A/A
Volume 77.17 Å3
Hydrophobicity 0.018
Hydrophilicity 1.210
Buriedness 0.596
Don/acc character 5.849
SiteScore 0.492
D Score 0.339

Compound EPE
Residue . / 450
Chain YA / A
Non-redundant False
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound EPE
Residue . / 451
Chain ZA / A
Non-redundant False
Interacting RNA chains A/A
Volume 41.85 Å3
Hydrophobicity 0.000
Hydrophilicity 1.129
Buriedness 0.588
Don/acc character 5.389
SiteScore 0.400
D Score 0.250

Compound SPM
Residue . / 448
Chain WA / A
Non-redundant False
Interacting RNA chains A/A
Volume 305.61 Å3
Hydrophobicity 0.131
Hydrophilicity 0.876
Buriedness 0.587
Don/acc character 1.990
SiteScore 0.682
D Score 0.654