HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4nyb

System information

Experimental technique X-ray
Experimental resolution 3.10
System mass 27.49 kDa
Deposition year 2013
Molecule type RNA
# RNA entities 1
Organism Escherichia
RCSB PDB Entry 4nyb
Reference Warner Katherine Deigan, Homan Philip, Weeks Kevin M., Smith Alison G., Abell Chris, Ferré-D’Amaré Adrian R.. . Validating Fragment-Based Drug Discovery for Biological RNAs: Lead Fragments Bind and Remodel the TPP Riboswitch Specifically Chemistry & Biology
Equivalence Class NR_all_42241.5
BGSU version: 4.49

Compound 2QC
Residue . / 101
Chain B / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: riboswitch
RNA family global riboswitch
Volume 391.71 Å3
Hydrophobicity 0.756
Hydrophilicity 0.849
Buriedness 0.766
Don/acc character 1.884
SiteScore 1.130
D Score 0.992
Kd 103uM