Complex 4far
System information
Experimental technique | X-ray |
Experimental resolution | 2.86 |
System mass | 132.26 kDa |
Deposition year | 2012 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | Oceanobacillus |
RCSB PDB Entry | 4far |
Reference | Marcia Marco, Pyle Anna Marie. . Visualizing Group II Intron Catalysis through the Stages of Splicing Cell |
Compound | EPE |
Residue | . / 447 |
Chain | WA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 78.20 Å3 |
Hydrophobicity | 0.115 |
Hydrophilicity | 1.429 |
Buriedness | 0.640 |
Don/acc character | 1.548 |
SiteScore | 0.579 |
D Score | 0.369 |
Compound | EPE |
Residue | . / 449 |
Chain | YA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | EPE |
Residue | . / 454 |
Chain | DB / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 53.16 Å3 |
Hydrophobicity | 0.120 |
Hydrophilicity | 1.056 |
Buriedness | 0.588 |
Don/acc character | 3.534 |
SiteScore | 0.413 |
D Score | 0.290 |
Compound | SPM |
Residue | . / 452 |
Chain | BB / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 302.87 Å3 |
Hydrophobicity | 0.097 |
Hydrophilicity | 1.162 |
Buriedness | 0.631 |
Don/acc character | 0.877 |
SiteScore | 0.766 |
D Score | 0.697 |
Compound | SPM |
Residue | . / 453 |
Chain | CB / A |
Non-redundant | True |
Interacting RNA chains | A/A |
Volume | 207.51 Å3 |
Hydrophobicity | 0.000 |
Hydrophilicity | 1.359 |
Buriedness | 0.682 |
Don/acc character | 1.387 |
SiteScore | 0.720 |
D Score | 0.561 |