HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4far

System information

Experimental technique X-ray
Experimental resolution 2.86
System mass 132.26 kDa
Deposition year 2012
Molecule type RNA
# RNA entities 1
Organism Oceanobacillus
RCSB PDB Entry 4far
Reference Marcia Marco, Pyle Anna Marie. . Visualizing Group II Intron Catalysis through the Stages of Splicing Cell

Compound EPE
Residue . / 447
Chain WA / A
Non-redundant False
Interacting RNA chains A/A
Volume 84.38 Å3
Hydrophobicity 0.022
Hydrophilicity 1.086
Buriedness 0.589
Don/acc character 2.094
SiteScore 0.553
D Score 0.460

Compound EPE
Residue . / 449
Chain YA / A
Non-redundant False
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound EPE
Residue . / 454
Chain DB / A
Non-redundant False
Interacting RNA chains A/A
Volume 54.54 Å3
Hydrophobicity 0.000
Hydrophilicity 0.882
Buriedness 0.570
Don/acc character 5.239
SiteScore 0.391
D Score 0.285

Compound SPM
Residue . / 452
Chain BB / A
Non-redundant False
Interacting RNA chains A/A
Volume 321.39 Å3
Hydrophobicity 0.078
Hydrophilicity 0.968
Buriedness 0.614
Don/acc character 2.039
SiteScore 0.705
D Score 0.669

Compound SPM
Residue . / 453
Chain CB / A
Non-redundant True
Interacting RNA chains A/A
Volume 215.40 Å3
Hydrophobicity 0.142
Hydrophilicity 1.007
Buriedness 0.668
Don/acc character 3.071
SiteScore 0.634
D Score 0.561