Complex 4far
System information
Experimental technique | X-ray |
Experimental resolution | 2.86 |
System mass | 132.26 kDa |
Deposition year | 2012 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | Oceanobacillus |
RCSB PDB Entry | 4far |
Reference | Marcia Marco, Pyle Anna Marie. . Visualizing Group II Intron Catalysis through the Stages of Splicing Cell |
Compound | EPE |
Residue | . / 447 |
Chain | WA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 84.38 Å3 |
Hydrophobicity | 0.022 |
Hydrophilicity | 1.086 |
Buriedness | 0.589 |
Don/acc character | 2.094 |
SiteScore | 0.553 |
D Score | 0.460 |
Compound | EPE |
Residue | . / 449 |
Chain | YA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | EPE |
Residue | . / 454 |
Chain | DB / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 54.54 Å3 |
Hydrophobicity | 0.000 |
Hydrophilicity | 0.882 |
Buriedness | 0.570 |
Don/acc character | 5.239 |
SiteScore | 0.391 |
D Score | 0.285 |
Compound | SPM |
Residue | . / 452 |
Chain | BB / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 321.39 Å3 |
Hydrophobicity | 0.078 |
Hydrophilicity | 0.968 |
Buriedness | 0.614 |
Don/acc character | 2.039 |
SiteScore | 0.705 |
D Score | 0.669 |
Compound | SPM |
Residue | . / 453 |
Chain | CB / A |
Non-redundant | True |
Interacting RNA chains | A/A |
Volume | 215.40 Å3 |
Hydrophobicity | 0.142 |
Hydrophilicity | 1.007 |
Buriedness | 0.668 |
Don/acc character | 3.071 |
SiteScore | 0.634 |
D Score | 0.561 |