HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4far

System information

Experimental technique X-ray
Experimental resolution 2.86
System mass 132.26 kDa
Deposition year 2012
Molecule type RNA
# RNA entities 1
Organism Oceanobacillus
RCSB PDB Entry 4far
Reference Marcia Marco, Pyle Anna Marie. . Visualizing Group II Intron Catalysis through the Stages of Splicing Cell

Compound EPE
Residue . / 447
Chain WA / A
Non-redundant False
Interacting RNA chains A/A
Volume 93.98 Å3
Hydrophobicity 0.033
Hydrophilicity 1.016
Buriedness 0.620
Don/acc character 1.427
SiteScore 0.729
D Score 0.501

Compound EPE
Residue . / 449
Chain YA / A
Non-redundant False
Interacting RNA chains A/A
Volume 59.68 Å3
Hydrophobicity 0.011
Hydrophilicity 0.745
Buriedness 0.505
Don/acc character 4.035
SiteScore 0.847
D Score 0.705

Compound EPE
Residue . / 454
Chain DB / A
Non-redundant False
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound SPM
Residue . / 452
Chain BB / A
Non-redundant False
Interacting RNA chains A/A
Volume 341.63 Å3
Hydrophobicity 0.041
Hydrophilicity 1.057
Buriedness 0.624
Don/acc character 1.965
SiteScore 0.865
D Score 0.667

Compound SPM
Residue . / 453
Chain CB / A
Non-redundant True
Interacting RNA chains A/A
Volume 214.03 Å3
Hydrophobicity 0.226
Hydrophilicity 1.025
Buriedness 0.676
Don/acc character 2.763
SiteScore 0.800
D Score 0.577