HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4lvy

System information

Experimental technique X-ray
Experimental resolution 2.00
System mass 29.70 kDa
Deposition year 2013
Molecule type RNA
# RNA entities 1
Organism Streptococcus
RCSB PDB Entry 4lvy
Reference Trausch Jeremiah J., Batey Robert T.. . A Disconnect between High-Affinity Binding and Efficient Regulation by Antifolates and Purines in the Tetrahydrofolate Riboswitch Chemistry & Biology
Equivalence Class NR_all_78797.7
BGSU version: 4.48

Compound LYA
Residue . / 101
Chain B / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: riboswitch
RNA family global riboswitch
Volume 81.63 Å3
Hydrophobicity 0.103
Hydrophilicity 0.900
Buriedness 0.584
Don/acc character 3.630
SiteScore 0.712
D Score 0.498
Kd 110uM

Compound LYA
Residue . / 102
Chain C / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: riboswitch
RNA family global riboswitch
Volume 103.24 Å3
Hydrophobicity 0.090
Hydrophilicity 0.924
Buriedness 0.637
Don/acc character 1.028
SiteScore 0.765
D Score 0.551
Kd 110uM