Complex 4gpy
System information
Experimental technique | X-ray |
Experimental resolution | 2.80 |
System mass | 15.64 kDa |
Deposition year | 2012 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | N/A |
RCSB PDB Entry | 4gpy |
Reference | Kondo Jiro, Koganei Mai, Maianti Juan Pablo, Ly Vu Linh, Hanessian Stephen. . Crystal Structures of a Bioactive 6′‐Hydroxy Variant of Sisomicin Bound to the Bacterial and Protozoal Ribosomal Decoding Sites ChemMedChem |
Compound | 6HS |
Residue | . / 101 |
Chain | C / A |
Non-redundant | True |
Interacting RNA chains | A/A, B/B |
Volume | 107.02 Å3 |
Hydrophobicity | 0.097 |
Hydrophilicity | 0.890 |
Buriedness | 0.572 |
Don/acc character | 2.758 |
SiteScore | 0.670 |
D Score | 0.640 |
Compound | 6HS |
Residue | . / 102 |
Chain | D / A |
Non-redundant | False |
Interacting RNA chains | A/A, B/B |
Volume | 47.33 Å3 |
Hydrophobicity | 0.253 |
Hydrophilicity | 0.789 |
Buriedness | 0.543 |
Don/acc character | 2.533 |
SiteScore | 0.593 |
D Score | 0.557 |