HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4y1i

System information

Experimental technique X-ray
Experimental resolution 2.85
System mass 69.04 kDa
Deposition year 2015
Molecule type RNA
# RNA entities 1
Organism Lactococcus
RCSB PDB Entry 4y1i
Reference Price Ian R., Gaballa Ahmed, Ding Fang, Helmann John D., Ke Ailong. . Mn2+-Sensing Mechanisms of yybP-ykoY Orphan Riboswitches Molecular Cell

Compound GTP
Residue . / 201
Chain C / A
Non-redundant False
Interacting RNA chains A/A
Volume 128.28 Å3
Hydrophobicity 0.000
Hydrophilicity 1.081
Buriedness 0.597
Don/acc character 0.583
SiteScore 0.677
D Score 0.426

Compound GTP
Residue . / 226
Chain BA / A
Non-redundant False
Interacting RNA chains B/B
Volume 143.37 Å3
Hydrophobicity 0.019
Hydrophilicity 0.758
Buriedness 0.457
Don/acc character 2.261
SiteScore 1.043
D Score 0.967