Complex 4f8u
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.00 |
| System mass | 14.69 kDa |
| Deposition year | 2012 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 4f8u |
| Reference | Kondo Jiro, Koganei Mai, Kasahara Tomoko. . Crystal Structure and Specific Binding Mode of Sisomicin to the Bacterial Ribosomal Decoding Site ACS Medicinal Chemistry Letters |
| Equivalence Class |
NR_all_71199.7
BGSU version: 4.48 |
| Compound | SIS |
| Residue | . / 101 |
| Chain | C / A |
| Non-redundant | True |
| Interacting RNA chains | B/B, A/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/A: rRNA, B/B: rRNA |
| RNA family global | rRNA |
| Volume | 115.93 Å3 |
| Hydrophobicity | 0.104 |
| Hydrophilicity | 0.736 |
| Buriedness | 0.550 |
| Don/acc character | 4.675 |
| SiteScore | 0.857 |
| D Score | 0.706 |
| Kd | — |
| Compound | SIS |
| Residue | . / 101 |
| Chain | D / B |
| Non-redundant | True |
| Interacting RNA chains | B/B, A/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/A: rRNA, B/B: rRNA |
| RNA family global | rRNA |
| Volume | 51.79 Å3 |
| Hydrophobicity | 0.256 |
| Hydrophilicity | 0.736 |
| Buriedness | 0.536 |
| Don/acc character | 2.865 |
| SiteScore | 0.788 |
| D Score | 0.622 |
| Kd | — |