Complex 4e8p
System information
Experimental technique | X-ray |
Experimental resolution | 3.28 |
System mass | 131.47 kDa |
Deposition year | 2012 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | Oceanobacillus |
RCSB PDB Entry | 4e8p |
Reference | Marcia Marco, Pyle Anna Marie. . Visualizing Group II Intron Catalysis through the Stages of Splicing Cell |
Compound | EPE |
Residue | . / 447 |
Chain | VA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 76.49 Å3 |
Hydrophobicity | 0.011 |
Hydrophilicity | 1.038 |
Buriedness | 0.564 |
Don/acc character | 4.961 |
SiteScore | 0.489 |
D Score | 0.399 |
Compound | EPE |
Residue | . / 448 |
Chain | WA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | EPE |
Residue | . / 449 |
Chain | XA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 65.86 Å3 |
Hydrophobicity | 0.472 |
Hydrophilicity | 0.820 |
Buriedness | 0.655 |
Don/acc character | 1.041 |
SiteScore | 0.534 |
D Score | 0.451 |
Compound | EPE |
Residue | . / 451 |
Chain | ZA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 132.40 Å3 |
Hydrophobicity | 0.000 |
Hydrophilicity | 1.057 |
Buriedness | 0.598 |
Don/acc character | 2.524 |
SiteScore | 0.608 |
D Score | 0.538 |
Compound | SPM |
Residue | . / 446 |
Chain | UA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 186.94 Å3 |
Hydrophobicity | 0.278 |
Hydrophilicity | 0.791 |
Buriedness | 0.627 |
Don/acc character | 1.066 |
SiteScore | 0.619 |
D Score | 0.569 |