Complex 4faq
System information
Experimental technique | X-ray |
Experimental resolution | 3.11 |
System mass | 132.13 kDa |
Deposition year | 2012 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | Oceanobacillus |
RCSB PDB Entry | 4faq |
Reference | Marcia Marco, Pyle Anna Marie. . Visualizing Group II Intron Catalysis through the Stages of Splicing Cell |
Compound | EPE |
Residue | . / 447 |
Chain | VA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 79.92 Å3 |
Hydrophobicity | 0.131 |
Hydrophilicity | 0.950 |
Buriedness | 0.550 |
Don/acc character | 1.911 |
SiteScore | 0.505 |
D Score | 0.430 |
Compound | EPE |
Residue | . / 448 |
Chain | WA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 40.13 Å3 |
Hydrophobicity | 0.031 |
Hydrophilicity | 1.045 |
Buriedness | 0.580 |
Don/acc character | 4.959 |
SiteScore | 0.382 |
D Score | 0.256 |
Compound | EPE |
Residue | . / 450 |
Chain | YA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 214.38 Å3 |
Hydrophobicity | 0.222 |
Hydrophilicity | 0.804 |
Buriedness | 0.681 |
Don/acc character | 3.732 |
SiteScore | 0.612 |
D Score | 0.545 |
Compound | EPE |
Residue | . / 451 |
Chain | ZA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | EPE |
Residue | . / 452 |
Chain | AB / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 61.40 Å3 |
Hydrophobicity | 0.123 |
Hydrophilicity | 1.010 |
Buriedness | 0.627 |
Don/acc character | 1.857 |
SiteScore | 0.433 |
D Score | 0.313 |
Compound | SPM |
Residue | . / 445 |
Chain | TA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 80.95 Å3 |
Hydrophobicity | 0.175 |
Hydrophilicity | 1.188 |
Buriedness | 0.607 |
Don/acc character | 1.046 |
SiteScore | 0.526 |
D Score | 0.387 |
Compound | SPM |
Residue | . / 446 |
Chain | UA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 261.02 Å3 |
Hydrophobicity | 0.124 |
Hydrophilicity | 1.223 |
Buriedness | 0.661 |
Don/acc character | 1.125 |
SiteScore | 0.864 |
D Score | 0.796 |