HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4znp

System information

Experimental technique X-ray
Experimental resolution 2.94
System mass 48.17 kDa
Deposition year 2015
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 4znp
Reference Ren Aiming, Rajashankar Kanagalaghatta R., Patel Dinshaw J.. . Global RNA Fold and Molecular Recognition for a pfl Riboswitch Bound to ZMP, a Master Regulator of One-Carbon Metabolism Structure
Equivalence Class NR_all_45659.3
BGSU version: 4.48

Compound AMZ
Residue . / 101
Chain C / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled ion
RNA environment global RNA
RNA family chains A/A: riboswitch
RNA family global riboswitch
Volume 202.71 Å3
Hydrophobicity 0.158
Hydrophilicity 1.070
Buriedness 0.689
Don/acc character 1.952
SiteScore 1.007
D Score 0.829
Kd 4.7uM

Compound AMZ
Residue . / 101
Chain F / B
Non-redundant False
Interacting RNA chains B/B
RNA environment detailled ion
RNA environment global RNA
RNA family chains B/B: riboswitch
RNA family global riboswitch
Volume 150.23 Å3
Hydrophobicity 0.162
Hydrophilicity 1.206
Buriedness 0.722
Don/acc character 1.655
SiteScore 0.760
D Score 0.627
Kd 4.7uM