HARIBOSS - RNA-SM complexes list

4v4h

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Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.

SM: KSG KSG

4v51

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Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin

SM: PAR PAR

4v52

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Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.

SM: NMY NMY NMY NMY

4v53

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Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.

SM: LLL LLL LLL LLL LLL LLL LLL LLL

4v55

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Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).

SM: LLL LLL LLL LLL

4v56

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Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.

SM: SCM SCM

4v57

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Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.

SM: NMY NMY NMY NMY SCM SCM

4v5c

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Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.

SM: PAR PAR

4v5d

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Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.

SM: PAR PAR

4v5f

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The structure of the ribosome with elongation factor G trapped in the post-translocational state

SM: FUA FUA

4v5g

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The crystal structure of the 70S ribosome bound to EF-Tu and tRNA

SM: GDP PAR PAR

4v5l

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The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog

SM: GCP PAR

4v5r

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The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.

SM: GDP

4v5y

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Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).

SM: PAR PAR PAR PAR

4v64

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Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.

SM: HYG HYG

4v6m

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Structure of the ribosome-SecYE complex in the membrane environment

SM: PEV PEV PEV PGV

4v7b

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Visualization of two tRNAs trapped in transit during EF-G-mediated translocation

SM: FUA

4v7s

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Crystal structure of the E. coli ribosome bound to telithromycin.

SM: TEL

4v7t

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Crystal structure of the E. coli ribosome bound to chloramphenicol.

SM: CLM

4v7u

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Crystal structure of the E. coli ribosome bound to erythromycin.

SM: ERY

4v7v

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Crystal structure of the E. coli ribosome bound to clindamycin.

SM: CLY

4v7w

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Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.

SM: CLM CLM

4v7x

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Structure of the Thermus thermophilus ribosome complexed with erythromycin.

SM: ERY ERY

4v7y

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Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.

SM: ZIT ZIT

4v7z

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Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.

SM: TEL TEL

4v85

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Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.

SM: GNP

4v89

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Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)

SM: GNP

4v8a

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The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.

SM: T8B T8B

4v8c

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Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).

SM: PAR PAR

4v8f

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Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).

SM: PAR PAR

4v8j

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Crystal structure of the bacterial ribosome ram mutation G347U.

SM: PAR PAR

4v8o

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Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3

SM: GCP

4v8q

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Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome

SM: GDP

4v8u

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Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.

SM: FUA FUA

4v97

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Crystal structure of the bacterial ribosome ram mutation G299A.

SM: PAR PAR

4v9a

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Crystal Structure of the 70S ribosome with tetracycline.

SM: TAC TAC

4v9b

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Crystal Structure of the 70S ribosome with tigecycline.

SM: T1C T1C

4v9c

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Allosteric control of the ribosome by small-molecule antibiotics

SM: NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY

4v9h

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Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state

SM: GCP

4v9l

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70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.

SM: GDP

4v9m

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70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.

SM: FUA FUA

4v9p

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Control of ribosomal subunit rotation by elongation factor G

SM: GCP

4v9q

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Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.

SM: BLS BLS

4w29

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70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.

SM: FUA FUA NMY NMY NMY NMY NMY NMY

4w2f

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites

SM: UAM UAM

4w2g

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites

SM: PCY PCY

4w2h

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site

SM: PCY PCY

4w2i

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites

SM: NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG NEG

4w90

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Crystal structure of Bacillus subtilis cyclic-di-AMP riboswitch ydaO

SM: 2BA 2BA

4w92

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Crystal structure of Bacillus subtilis cyclic-di-AMP riboswitch ydaO

SM: 2BA 2BA

4wc2

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Crystal structure of tRNA nucleotidyltransferase complexed with a primer tRNA and an incoming ATP analog

SM: APC

4wc6

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Structure of tRNA-processing enzyme complex 4

SM: ATP

4wc7

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Structure of tRNA-processing enzyme complex 5

SM: CTP

4wce

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The crystal structure of the large ribosomal subunit of Staphylococcus aureus

SM: EPE

4wf1

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Crystal structure of the E. coli ribosome bound to negamycin.

SM: NEG

4wf9

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The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

SM: TEL

4wfa

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The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

SM: EPE EPE EPE EPE ZLD

4wfb

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The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205

SM: 3LK EPE EPE EPE EPE

4wfn

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Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22 in complex with erythromycin

SM: ERY

4woi

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4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2

SM: PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR