Harnessing RIBOnucleic acid - Small molecules Structures
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Human Aprataxin (Aptx) bound to RNA-DNA, AMP, and Zn - product complex
SM: AMP AMP
Human Aprataxin (Aptx) bound to RNA-DNA and Zn - adenosine vanadate transition state mimic complex
SM: V5A V5A
Human Aprataxin (Aptx) AOA1 variant K197Q bound to RNA-DNA, AMP, and Zn - product complex
Crystal Structure Analysis of the 16mer GCAGACUUAAGUCUGC
SM: SPM
Crystal Structure of the 30S ribosomal subunit from a GidB (RsmG) mutant of Thermus thermophilus (HB8), bound with streptomycin
SM: SRY
Crystal structure of the E. coli thiM riboswitch in complex with 5-(azidomethyl)-2-methylpyrimidin-4-amine
SM: 2QB 2QB
Crystal structure of the E. coli thiM riboswitch in complex with (4-(1,2,3-thiadiazol-4-yl)phenyl)methanamine
SM: 2QC
Crystal structure of the E. coli thiM riboswitch in complex with thiamine
SM: VIB
Crystal structure of RtcA, the RNA 3'-terminal phosphate cyclase from Pyrococcus horikoshii, in complex with rACAAA3'phosphate and adenine.
SM: ADN
Structure of the SAM-I/IV riboswitch (env87(deltaU92))
SM: SAM
Crystal structure of the aminoglycoside resistance methyltransferase NpmA bound to the 30S ribosomal subunit
SM: SFG
Crystal structures of the bacterial ribosomal decoding site complexed with amikacin
SM: AKN AKN
Crystal structure of the bacterial A1408C-mutant ribosomal decoding site in complex with geneticin
SM: GET GET GET
Crystal structure of the tRNA-like structure from Turnip Yellow Mosaic Virus (TYMV), a tRNA mimicking RNA
Crystal structure of the peptolide 12C bound to bacterial ribosome
SM: PAR PAR
Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome
Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neomycin analog
SM: NMZ
Minimal U1 snRNP
SM: EPE EPE
Crystal structure of HIV-1 Reverse Transcriptase in complex with RNA/DNA and dATP
SM: DTP DTP
Thermus thermophilus RNA polymerase initially transcribing complex containing 6-mer RNA
SM: ATP
Crystal structure of an RNA aptamer bound to bromo-ligand analog in complex with Fab
SM: 2ZZ
Crystal structure of an RNA aptamer bound to trifluoroethyl-ligand analog in complex with Fab
SM: 2ZY
Thermoanaerobacter pseudethanolicus c-di-AMP riboswitch
SM: 2BA 2BA
Thermovirga lienii c-di-AMP riboswitch
c-di-AMP riboswitch from Thermoanaerobacter pseudethanolicus, iridium hexamine soak
ydao riboswitch binding to c-di-AMP
structure of ydao riboswitch binding with c-di-dAMP
Crystal structure of mutant ribosomal protein M218L TthL1 in complex with 80nt 23S RNA from Thermus thermophilus
SM: MES
Crystal structure of a eukaryotic group II intron lariat
SM: SPM SPM
Structure of histidinyl-tRNA synthetase in complex with tRNA(His)
SM: AMP
Crystal Structure of a PreQ1 Riboswitch
SM: PRF
Crystal structure of the Spinach RNA aptamer in complex with DFHBI, barium ions
SM: 38E
Crystal structure of the Spinach RNA aptamer in complex with DFHBI, magnesium ions
Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome
Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome
Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome
Crystal structure of the E. coli ribosome bound to flopristin.
SM: VIF VIF
Crystal structure of the E. coli ribosome bound to dalfopristin.
SM: DOL DOL
Crystal structure of the E. coli ribosome bound to virginiamycin M1.
SM: VIR VIR
Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.
Crystal structure of the E. coli ribosome bound to flopristin and linopristin.
Crystal structure of Anisomycin bound to the yeast 80S ribosome
SM: ANM ANM
Crystal structure of Cycloheximide bound to the yeast 80S ribosome
SM: 3HE 3HE
Crystal structure of Edeine bound to the yeast 80S ribosome
SM: EDE EDE
Crystal structure of Geneticin bound to the yeast 80S ribosome
SM: GET
Crystal structure of Homoharringtonine bound to the yeast 80S ribosome
SM: HMT HMT
Crystal structure of Lactimidomycin bound to the yeast 80S ribosome
SM: 3H3 3H3
Crystal structure of Lycorine bound to the yeast 80S ribosome
SM: 3KD 3KD
Crystal structure of Pactamycin bound to the yeast 80S ribosome
SM: PCY PCY
Crystal structure of Phyllanthoside bound to the yeast 80S ribosome
SM: 3K5 3K5
Crystal structure of Verrucarin bound to the yeast 80S ribosome
SM: 3L2 3L2
Crystal structure of Narciclasine bound to the yeast 80S ribosome
SM: 3KF 3KF
Crystal structure of Nagilactone C bound to the yeast 80S ribosome
SM: 3J2 3J2
Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome
SM: 3J6 3J6
Crystal structure of Cryptopleurine bound to the yeast 80S ribosome
SM: 3K8 3K8
Crystal structure of Blasticidin S bound to the yeast 80S ribosome
SM: BLS BLS
Crystal structure of T-2 toxin bound to the yeast 80S ribosome
SM: ZBA ZBA
mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like state
SM: GNP
Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
SM: TRP TRP
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Filter entries " Experimental resolution " between the two values. Global DB range: 0.6 – 11.2
Filter entries " Molecular weight (compound) " between the two values. Global DB range: 150 – 1000
Filter entries " Deposition date " between the two values. Global DB range: 1986 – 2027
Filter entries " Molecular weight (complex) " between the two values. Global DB range: 0 – 13090
Filter entries " Number of atoms " between the two values. Global DB range: 5 – 70
Filter entries " Number of interacting chains " between the two values. Global DB range: 1 – 4
Filter entries " Pocket size " between the two values. Global DB range: 15.9 – 394.0
Filter entries " SiteScore " between the two values. Global DB range: 0.3 – 1.3
Filter entries " Dscore " between the two values. Global DB range: -0.1 – 1.4
Filter entries " Exposure " between the two values. Global DB range: 0.1 – 1.0
Filter entries " Enclosure " between the two values. Global DB range: 0.3 – 1.0
Filter entries " Hydrophobicity " between the two values. Global DB range: 0.0 – 3.1
Filter entries " Hydrophilicity " between the two values. Global DB range: 0.2 – 2.8
Filter entries " Donor/Acceptor " between the two values. Global DB range: 0.0 – 5.0
Filter entries " Volume " between the two values. Global DB range: 21.2 – 1528.8