HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4v7x

System information

Experimental technique X-ray
Experimental resolution 3.00
System mass 4267.87 kDa
Deposition year 2010
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 4v7x
Reference Bulkley David, Innis C. Axel, Blaha Gregor, Steitz Thomas A.. . Revisiting the structures of several antibiotics bound to the bacterial ribosome Proceedings of the National Academy of Sciences
Equivalence Class NR_all_97519.80
BGSU version: 4.48

Compound ERY
Residue . / 3364
Chain FT / BA
Non-redundant True
Interacting RNA chains EA/BA
RNA environment detailled protein, ion
RNA environment global RNA/Protein
RNA family chains EA/BA: rRNA
RNA family global rRNA
Volume 1200.84 Å3
Hydrophobicity 0.481
Hydrophilicity 0.816
Buriedness 0.642
Don/acc character 0.794
SiteScore 1.156
D Score 1.059
Kd

Compound ERY
Residue . / 3330
Chain TIA / DA
Non-redundant True
Interacting RNA chains DC/DA
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains DC/DA: rRNA
RNA family global rRNA
Volume 737.11 Å3
Hydrophobicity 0.559
Hydrophilicity 1.329
Buriedness 0.757
Don/acc character 0.958
SiteScore 1.190
D Score 0.961
Kd