HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4u3u

System information

Experimental technique X-ray
Experimental resolution 2.90
System mass 6631.50 kDa
Deposition year 2014
Molecule type RNA/Protein
# RNA entities 1
Organism Saccharomyces
RCSB PDB Entry 4u3u
Reference Garreau de Loubresse Nicolas, Prokhorova Irina, Holtkamp Wolf, Rodnina Marina V., Yusupova Gulnara, Yusupov Marat. . Structural basis for the inhibition of the eukaryotic ribosome Nature
Equivalence Class NR_all_90506.85
BGSU version: 4.49

Compound 3HE
Residue . / 4215
Chain AWA / 1
Non-redundant True
Interacting RNA chains JA/1
RNA environment detailled protein, ion
RNA environment global RNA/Protein
RNA family chains JA/1: rRNA
RNA family global rRNA
Volume 571.78 Å3
Hydrophobicity 0.263
Hydrophilicity 1.387
Buriedness 0.795
Don/acc character 1.034
SiteScore 1.065
D Score 0.965
Kd

Compound 3HE
Residue . / 4252
Chain TUC / 5
Non-redundant True
Interacting RNA chains KD/5
RNA environment detailled protein, ion
RNA environment global RNA/Protein
RNA family chains KD/5: rRNA
RNA family global rRNA
Volume 648.61 Å3
Hydrophobicity 0.372
Hydrophilicity 1.389
Buriedness 0.783
Don/acc character 0.687
SiteScore 1.057
D Score 0.957
Kd