HARIBOSS logo

HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

× Close

Combine filters to refine your query. Each filter opens a dialog showing the values available in the data.


1918 RNA-SM complexes found
filters used:  With equivalence class  
Structure of complex 5hbw

5hbw

RNA primer-template complex with 2-methylimidazole-activated monomer analogue

SM: PZG PZG

Structure of complex 5hbx

5hbx

RNA primer-template complex with 2-methylimidazole-activated monomer analogue-2 binding sites

SM: PZG PZG PZG PZG PZG PZG PZG PZG

Structure of complex 5hby

5hby

RNA primer-template complex with 2-methylimidazole-activated monomer analogue-3 binding sites

SM: PZG PZG

Structure of complex 5hkv

5hkv

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lincomycin

SM: 3QB

Structure of complex 5hl7

5hl7

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lefamulin

SM: 62B EPE

Structure of complex 5i4l

5i4l

Crystal structure of Amicoumacin A bound to the yeast 80S ribosome

SM: UAM

Structure of complex 5ib7

5ib7

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin

SM: PAR SPE SPE

Structure of complex 5ib8

5ib8

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-site

SM: SPE

Structure of complex 5ibb

5ibb

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site

SM: SPE SPE SPE

Structure of complex 5iqr

5iqr

Structure of RelA bound to the 70S ribosome

SM: PAR

Structure of complex 5it7

5it7

Structure of the Kluyveromyces lactis 80S ribosome in complex with the cricket paralysis virus IRES and eEF2

SM: GCP

Structure of complex 5it8

5it8

High-resolution structure of the Escherichia coli ribosome

SM: 1PE 1PE PG4 PG4 PG4 PG4 PG4

Structure of complex 5iwa

5iwa

Crystal structure of the 30S ribosomal subunit from Thermus thermophilus in complex with the GE81112 peptide antibiotic

SM: 6EK

Structure of complex 5j5b

5j5b

Structure of the WT E coli ribosome bound to tetracycline

SM: 1PE 1PE PG4 PG4 PG4 PG4 PG4 TAC TAC

Structure of complex 5j7l

5j7l

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

SM: 1PE 1PE PG4 PG4 PG4 PG4 PG4 TAC TAC TAC TAC

Structure of complex 5j88

5j88

Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA

SM: 1PE 1PE PG4 PG4 PG4 PG4 PG4

Structure of complex 5j8a

5j8a

Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline

SM: 1PE 1PE PG4 PG4 PG4 PG4 PG4 T1C T1C

Structure of complex 5j8b

5j8b

Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome

SM: GCP

Structure of complex 5j91

5j91

Structure of the Wild-type 70S E coli ribosome bound to Tigecycline

SM: 1PE 1PE PG4 PG4 PG4 PG4 PG4 T1C T1C

Structure of complex 5jc9

5jc9

Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA

SM: 1PE 1PE PG4 PG4 PG4 PG4 PG4

Structure of complex 5jte

5jte

Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA

SM: ERY

Structure of complex 5ju8

5ju8

Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA

SM: ERY

Structure of complex 5jup

5jup

Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)

SM: GDP

Structure of complex 5juu

5juu

Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)

SM: GDP

Structure of complex 5kal

5kal

Terminal uridylyl transferase 4 from Trypanosoma brucei with bound UTP and UpU

SM: UTP UTP

Structure of complex 5kpy

5kpy

Structure of a 5-hydroxytryptophan aptamer

SM: 4PQ

Structure of complex 5krg

5krg

RNA 15mer duplex binding with PZG monomer

SM: PZG PZG PZG PZG

Structure of complex 5kx9

5kx9

Selective Small Molecule Inhibition of the FMN Riboswitch

SM: 6YG

Structure of complex 5l00

5l00

Self-complimentary RNA 15mer binding with GMP monomers

SM: 5GP 5GP 5GP 5GP

Structure of complex 5lks

5lks

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

SM: 3HE

Structure of complex 5lmv

5lmv

Structure of bacterial 30S-IF1-IF2-IF3-mRNA-tRNA translation pre-initiation complex(state-III)

SM: FME

Structure of complex 5lwj

5lwj

Solution NMR structure of the GTP binding Class II RNA aptamer-ligand-complex containing a protonated adenine nucleotide with a highly shifted pKa.

SM: GTP

Structure of complex 5lzd

5lzd

Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)

SM: GNP

Structure of complex 5lzs

5lzs

Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B

SM: GDP

Structure of complex 5lzw

5lzw

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.

SM: GCP

Structure of complex 5m1j

5m1j

Nonstop ribosomal complex bound with Dom34 and Hbs1

SM: GNP

Structure of complex 5mei

5mei

Crystal structure of Agelastatin A bound to the 80S ribosome

SM: 7MB 7MB

Structure of complex 5ndg

5ndg

Crystal structure of geneticin (G418) bound to the yeast 80S ribosome

SM: GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET

Structure of complex 5ndj

5ndj

Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)

SM: 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ

Structure of complex 5ndk

5ndk

Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA

SM: 8UZ 8UZ 8UZ 8UZ

Structure of complex 5ndv

5ndv

Structure of complex 5ndw

5ndw

Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome

SM: 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ

Structure of complex 5nrg

5nrg

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02

SM: 95H EPE

Structure of complex 5ns4

5ns4

Crystal structures of Cy3 cyanine fluorophores stacked onto the end of double-stranded RNA

SM: 96T

Structure of complex 5o61

5o61

The complete structure of the Mycobacterium smegmatis 70S ribosome

SM: PHE

Structure of complex 5ob3

5ob3

iSpinach aptamer

SM: 1TU SPM

Structure of complex 5obm

5obm

Crystal structure of Gentamicin bound to the yeast 80S ribosome

SM: LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL

Structure of complex 5omw

5omw

Mutant T252A of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformation

SM: LSS LSS

Structure of complex 5on2

5on2

Quaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformation

SM: LSS LSS

Structure of complex 5on3

5on3

Quaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of leucine in the aminoacylation conformation

SM: LSS LSS

Structure of complex 5on6

5on6

Crystal structure of haemanthamine bound to the 80S ribosome

SM: HN8 HN8

Structure of complex 5onh

5onh

Quaternary complex of wild type E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformation

SM: LSS LSS

Structure of complex 5ot7

5ot7

Elongation factor G-ribosome complex captures in the absence of inhibitors.

SM: GDP

Structure of complex 5t83

5t83

Structure of a guanidine-I riboswitch from S. acidophilus

SM: SPK

Structure of complex 5tbw

5tbw

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

SM: 7AL 7AL

Structure of complex 5tcu

5tcu

Methicillin sensitive Staphylococcus aureus 70S ribosome

SM: PAR

Structure of complex 5tgm

5tgm

Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro

SM: PHE PHE SPS SPS

Structure of complex 5ued

5ued

RNA primer-template complex with guanosine dinucleotide ligand G(5')pp(5')G

SM: 86S 86S

Structure of complex 5uee

5uee

RNA primer-template complex with guanosine dinucleotide ligand G(5')ppp(5')G

SM: GP3 GP3

Structure of complex 5ueg

5ueg

RNA primer-template complex with guanosine dinucleotide G(5')pppp(5')G ligand

SM: 86P 86P 86P 86P